Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32067 | Sorghum | mitochondrion | 93.89 | 61.89 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 92.42 | 60.63 |
| TraesCS3A01G021300.1 | Wheat | extracellular | 92.18 | 60.61 |
| VIT_17s0000g03030.t01 | Wine grape | nucleus | 78.12 | 60.45 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 91.93 | 60.3 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 90.59 | 59.66 |
| KRH41772 | Soybean | plastid | 74.45 | 51.74 |
| KRH60477 | Soybean | plastid | 74.45 | 51.61 |
| GSMUA_Achr3P20920_001 | Banana | mitochondrion, nucleus | 78.85 | 51.56 |
| Zm00001d040082_P003 | Maize | plastid | 88.39 | 51.39 |
| Bra018747.1-P | Field mustard | plastid | 73.47 | 50.93 |
| CDX93688 | Canola | plastid | 73.47 | 50.93 |
| CDY40601 | Canola | nucleus, plastid | 73.47 | 50.89 |
| AT1G48650.2 | Thale cress | nucleus, plastid | 74.57 | 50.58 |
| Solyc03g118920.2.1 | Tomato | mitochondrion, nucleus | 73.23 | 49.88 |
| Os03t0748800-01 | Rice | mitochondrion | 66.14 | 47.04 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 15.89 | 35.42 |
| Os10t0471350-01 | Rice | nucleus | 42.54 | 34.87 |
| Os02t0301500-01 | Rice | nucleus | 22.0 | 32.97 |
| Os06t0192500-02 | Rice | mitochondrion | 13.81 | 27.7 |
| Os01t0212100-01 | Rice | nucleus | 22.0 | 25.71 |
| Os03t0314100-01 | Rice | cytosol, nucleus, plastid | 17.36 | 25.18 |
| Os11t0310800-01 | Rice | nucleus | 21.64 | 25.0 |
| Os01t0767700-01 | Rice | nucleus | 33.86 | 22.65 |
| Os06t0343100-01 | Rice | nucleus | 22.98 | 17.34 |
| Os04t0432200-00 | Rice | extracellular | 1.47 | 16.44 |
| Os05t0389800-01 | Rice | nucleus | 20.78 | 15.89 |
| Os07t0508000-01 | Rice | nucleus | 22.49 | 14.38 |
| Os02t0736600-01 | Rice | nucleus | 21.52 | 13.84 |
| Os07t0621500-01 | Rice | cytosol, nucleus | 18.46 | 11.73 |
| Os02t0736800-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A0P0UXU4 | ProteinID:BAS70109.1 |
| InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004004 | GO:GO:0004332 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0006091 | GO:GO:0006096 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016829 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR014720 | EnsemblPlantsGene:Os01g0118100 | EnsemblPlants:Os01t0118100-01 | InterPro:P-loop_NTPase |
| PFAM:PF00035 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR18934 | PANTHER:PTHR18934:SF192 | SMART:SM00358 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 |
| SUPFAM:SSF54768 | UniParc:UPI00039395C4 | InterPro:dsRBD_dom | SEG:seg | : | : |
Description
Similar to Fructose-bisphosphate aldolase. (Os01t0118100-01)
Coordinates
chr1:+:1024186..1030112
Molecular Weight (calculated)
92061.2 Da
IEP (calculated)
8.648
GRAVY (calculated)
-0.292
Length
818 amino acids
Sequence
(BLAST)
(BLAST)
001: KVRLEGMKGR DTRLLFCTTG VLLRRLLVDR NLKGVTHVIV DEIHERGMNE DFLLIVLKDL LPRRPELRLV LMSATLNAEL FSSYFGGAPM IHIPGFTYPV
101: RSRFLEDILE ITGHRLTPYN QIDDYGQEKS WKMQKQALRK RKSQIASVVE DTVQAADLRD YSARTRDSLS CWNPDSIGFN LIENVLCHIC QKERAGAVLV
201: FMTGWDDINA LKEQLQANPL LGDPSKVLLL ACHGSMASSE QKLIFDRPEP GVRKIVLATN LAETSITIND VVFVVDCGKA KETSYDALNN TPCLLPTWIS
301: KASARQRRGR AGRVQPGECY HLYPQCVYEA FADYQLPELL RTPLQSLCLQ IKSLRLGSIS EFLSRALQSP ESLSVENAIE YLKVIGAFDR NEELTILGKH
401: LSMLPVEPKL GKMLIFGAIF NCLDPILTIV SGLSVRDPFL TPFDKKDLAE SAKLQFSCRD YSDHLALVRA YEGWREAERD RNGYDYCWKN FLSVQTLKAI
501: DSLRRQFLFL LRDTGLVDEN MTACNKWSRD ENLVRAVICA GLYPGVSSVV NKEKSISLKT MEDGQVMLYS SSVNGKETKI PFPWLVFNEK VKVNSVFLRD
601: STAISDSILL LFGGNIKQGG LDGHLKMLGG YLEFFMSRDL ASTYLSLKSE LDNLIHCKLQ NPRMDIQTSE ELLSAIRLLV TEDPCNGRFV YGRQEQRSKK
701: AKTMFSAAPM SHGGGGNGGD NAKNQLQTLL TRAGHDNPSY KTKQIKNSLF RSTVEFNGMQ FVGQPCANKK LAEKDAAGEA LNWLTGGAPS DSRDPQDMDH
801: MSMLQKPPRR KRHHHRRG
101: RSRFLEDILE ITGHRLTPYN QIDDYGQEKS WKMQKQALRK RKSQIASVVE DTVQAADLRD YSARTRDSLS CWNPDSIGFN LIENVLCHIC QKERAGAVLV
201: FMTGWDDINA LKEQLQANPL LGDPSKVLLL ACHGSMASSE QKLIFDRPEP GVRKIVLATN LAETSITIND VVFVVDCGKA KETSYDALNN TPCLLPTWIS
301: KASARQRRGR AGRVQPGECY HLYPQCVYEA FADYQLPELL RTPLQSLCLQ IKSLRLGSIS EFLSRALQSP ESLSVENAIE YLKVIGAFDR NEELTILGKH
401: LSMLPVEPKL GKMLIFGAIF NCLDPILTIV SGLSVRDPFL TPFDKKDLAE SAKLQFSCRD YSDHLALVRA YEGWREAERD RNGYDYCWKN FLSVQTLKAI
501: DSLRRQFLFL LRDTGLVDEN MTACNKWSRD ENLVRAVICA GLYPGVSSVV NKEKSISLKT MEDGQVMLYS SSVNGKETKI PFPWLVFNEK VKVNSVFLRD
601: STAISDSILL LFGGNIKQGG LDGHLKMLGG YLEFFMSRDL ASTYLSLKSE LDNLIHCKLQ NPRMDIQTSE ELLSAIRLLV TEDPCNGRFV YGRQEQRSKK
701: AKTMFSAAPM SHGGGGNGGD NAKNQLQTLL TRAGHDNPSY KTKQIKNSLF RSTVEFNGMQ FVGQPCANKK LAEKDAAGEA LNWLTGGAPS DSRDPQDMDH
801: MSMLQKPPRR KRHHHRRG
0001: MQLYSAIFRG HIRPNAVVGA ASMFIQHNSI QLHRSPKLLL RPSSVVRSLH CRRSGGLVTH SQRSRVLCVK AARGDASSST LGIEWRAANL PYFQRQNSGY
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKSKNHA KASTKWG
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKSKNHA KASTKWG
Arabidopsis Description
DEA(D/H)-box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYJ6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.