Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plasma membrane, golgi, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G392800.1 | Wheat | nucleus | 98.43 | 98.43 |
| TraesCS5D01G397600.1 | Wheat | nucleus | 98.35 | 98.35 |
| TraesCS5A01G387700.2 | Wheat | golgi, nucleus | 98.0 | 97.58 |
| Os03t0748800-01 | Rice | mitochondrion | 91.91 | 91.91 |
| KXG37551 | Sorghum | nucleus, vacuole | 90.96 | 90.8 |
| Zm00001d034013_P002 | Maize | golgi, mitochondrion, vacuole | 89.57 | 85.9 |
| GSMUA_Achr4P07530_001 | Banana | mitochondrion | 80.09 | 79.06 |
| KRH44757 | Soybean | plastid | 76.52 | 75.8 |
| Solyc01g006710.2.1 | Tomato | mitochondrion | 75.91 | 75.0 |
| AT5G04895.1 | Thale cress | mitochondrion | 75.65 | 74.94 |
| PGSC0003DMT400055091 | Potato | mitochondrion | 75.83 | 74.91 |
| Bra009414.1-P | Field mustard | mitochondrion | 74.7 | 74.37 |
| CDX98799 | Canola | mitochondrion | 74.61 | 74.35 |
| CDX70187 | Canola | mitochondrion | 74.7 | 74.31 |
| KRH13104 | Soybean | mitochondrion | 24.17 | 64.95 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 59.65 | 55.01 |
| HORVU1Hr1G039880.1 | Barley | nucleus | 39.39 | 47.94 |
| HORVU4Hr1G052730.3 | Barley | cytosol | 20.26 | 32.32 |
| HORVU3Hr1G028550.17 | Barley | cytosol | 17.57 | 28.98 |
| HORVU7Hr1G032080.3 | Barley | plastid | 18.61 | 26.13 |
| HORVU3Hr1G074660.7 | Barley | plastid | 26.61 | 24.02 |
| HORVU1Hr1G056370.1 | Barley | nucleus | 20.61 | 22.3 |
| HORVU1Hr1G056400.1 | Barley | nucleus | 20.61 | 22.25 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 23.22 | 21.5 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 20.09 | 21.39 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 21.13 | 19.24 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 19.39 | 17.33 |
| HORVU5Hr1G019730.1 | Barley | nucleus, plastid | 21.91 | 14.75 |
| HORVU2Hr1G030040.17 | Barley | nucleus | 21.74 | 13.7 |
| PGSC0003DMT400041647 | Potato | cytosol | 2.09 | 6.54 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287SC99 | ncoils:Coil |
| InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:HORVU5Hr1G094990 |
| EnsemblPlants:HORVU5Hr1G094990.5 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF103 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | UniParc:UPI000B4691D6 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:-:597438891..597446839
Molecular Weight (calculated)
129207.0 Da
IEP (calculated)
8.713
GRAVY (calculated)
-0.390
Length
1150 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRRVLRRGLG ILLVPLPGPL SRPPPPPIPL AALLLLPRRL DAFSRRPFCG YSGGRAVEQF SDDEYDHEYE DHRPSSSVAN IDEWRWKLSM LQRNAEEQEI
0101: ISRDRRDRRD YDQIANLAKR MGLYSELYGK VIVASKVPLP NYRPDLDDKR PQREVVIPLS LQRRVEGFVQ EHLDRSLLPF DKDSGKTESG SEKAEHVNLD
0201: EKLDPLLDES VMEKILQRKS LRMRNFQRSW QESPEGVNMV EFRKSLPAYK EKERLLAAIA RNQVIVISGE TGCGKTTQLP QFVLESEIQS GRGAFCNIIC
0301: TQPRRISAMA VAERVSTERG ENLGESVGYK VRLEGIRGKD THLLFCTSGI LLRRLLSDRN LNGVSHVFVD EIHERGMNED FLLIVLKDLL SRRPDLRLIL
0401: MSATLNAELF SSYFGGAPTI HIPGFTHPVR AHFLEDILER TGYKMTASNQ LDDYGQDKVW KTQRQLLPRK RKNQITTLVE DALQNSNFET YGSRTRDSLA
0501: NWNPDCIGFN LIEAVLCHIC RKERAGAVLV FMTGWDDISS LKDQLKAHPL LGDPNRVLLL SCHGSMATSE QRLIFDKAPP NVRKVVLATN MAEASITIND
0601: IVFVMDCGKA KETTYDALNN TPCLLPSWIS KASARQRRGR AGRVQPGECY HLYPRCVYDA FAEYQLPELL RTPLNSLCLQ IKSLQVGSIG EFLSAALQPP
0701: EPRAVQNAVE FLKLIGSLDE NENLTDLGRY LSMLPVDPKL GKMLIMGAVF RCIDPILTVV AGLSARDPFL LPQDKKDLAG TAKSRFSAKD YSDHMALVRA
0801: YEGWKDAERE GSGYEYCWRN FLSAQTLQAI HSLRKQFSYI LKDAGLIDSD ANTNNSLSHN QSLVRGVICS GLFPGISSVV HRENSMSFKT MDDGQVLVYA
0901: NSVNAKYQTI PYPWLVFGEK VKVNAVFIRD STGVSDSILI LFGGAVTKGS AAGHLKMLDG YIDLFMDPSL SECYLQLKEE LDKLVHKKLE DPTFDIHKEG
1001: KYILFAAQEL AAGDLCEGRF VFGRETSRAR LRDNEEGKSN IIKDGMNPKS LLQTLLMRAG HTPPKYKTKH LKTNEFRAMX XXXXMQFVGK PKRNKQVAER
1101: DAAIEALGWL TQTSGTKLQD EGDDSPLDLT DNMLKLLSRP RKRTRNNPKK
0101: ISRDRRDRRD YDQIANLAKR MGLYSELYGK VIVASKVPLP NYRPDLDDKR PQREVVIPLS LQRRVEGFVQ EHLDRSLLPF DKDSGKTESG SEKAEHVNLD
0201: EKLDPLLDES VMEKILQRKS LRMRNFQRSW QESPEGVNMV EFRKSLPAYK EKERLLAAIA RNQVIVISGE TGCGKTTQLP QFVLESEIQS GRGAFCNIIC
0301: TQPRRISAMA VAERVSTERG ENLGESVGYK VRLEGIRGKD THLLFCTSGI LLRRLLSDRN LNGVSHVFVD EIHERGMNED FLLIVLKDLL SRRPDLRLIL
0401: MSATLNAELF SSYFGGAPTI HIPGFTHPVR AHFLEDILER TGYKMTASNQ LDDYGQDKVW KTQRQLLPRK RKNQITTLVE DALQNSNFET YGSRTRDSLA
0501: NWNPDCIGFN LIEAVLCHIC RKERAGAVLV FMTGWDDISS LKDQLKAHPL LGDPNRVLLL SCHGSMATSE QRLIFDKAPP NVRKVVLATN MAEASITIND
0601: IVFVMDCGKA KETTYDALNN TPCLLPSWIS KASARQRRGR AGRVQPGECY HLYPRCVYDA FAEYQLPELL RTPLNSLCLQ IKSLQVGSIG EFLSAALQPP
0701: EPRAVQNAVE FLKLIGSLDE NENLTDLGRY LSMLPVDPKL GKMLIMGAVF RCIDPILTVV AGLSARDPFL LPQDKKDLAG TAKSRFSAKD YSDHMALVRA
0801: YEGWKDAERE GSGYEYCWRN FLSAQTLQAI HSLRKQFSYI LKDAGLIDSD ANTNNSLSHN QSLVRGVICS GLFPGISSVV HRENSMSFKT MDDGQVLVYA
0901: NSVNAKYQTI PYPWLVFGEK VKVNAVFIRD STGVSDSILI LFGGAVTKGS AAGHLKMLDG YIDLFMDPSL SECYLQLKEE LDKLVHKKLE DPTFDIHKEG
1001: KYILFAAQEL AAGDLCEGRF VFGRETSRAR LRDNEEGKSN IIKDGMNPKS LLQTLLMRAG HTPPKYKTKH LKTNEFRAMX XXXXMQFVGK PKRNKQVAER
1101: DAAIEALGWL TQTSGTKLQD EGDDSPLDLT DNMLKLLSRP RKRTRNNPKK
0001: MRFTKRISLF LGQTTRIHSR SLLGNPTLCR SYIVGPVSTS SPAFLISSRN GDGVTGLYYP IRRRFIGHTA EQFSDDEYEC EFEEHKASSS VANVDEWKWK
0101: LGILLANDSE QEIVSRDKRD RRDYEQISNL AKRMGLYSEI YGKVVVASKV PLPNYRPDLD DKRPQREVVL PLSLQRRVEG LLQEHLDSQQ LSSGKANECV
0201: ADSQPPKQTE ELPDENSDSF LDGSVMEKVL QRRSMRMRNM QRTWQESPEG RTMLEFRKTL PSFKDKERLL QAIARNQVIV VSGETGCGKT TQLPQYILES
0301: EIESGRGAFC NIICTQPRRI SAMAVSERVS AERGEPLGET VGFKVRLEGM RGKNTHLLFC TSGILLRRLL SDRNLNGVTH VFVDEIHERG MNEDFLIIVL
0401: KELLPRRPDL RLVLMSATLN AELFSNYYGG APTIHIPGFT HPVKAHFLED VLEITGYKLT SFNQVDDYGQ EKTWKTQKQL MPRKRKNQIT TLVEEALSKS
0501: NFESYNSRTR DSLSSWMPDC IGFNLIEAVL CHICRKERPG AVLVFLTGWD DIRSLSDQIK AHPLLGDPNR VLLLMCHGSM ATAEQRLIFE RAPPNIRKIV
0601: LATNMAEASI TINDVVFVVD CGKAKETTYD ALNNTPCLLP SWISQASARQ RRGRAGRLFP GECYHLYPKC VYDAFAEYQL PELLRTPLNS LCLQIKSLQV
0701: ESIAEFLSAA LQAPESLAVQ NAIGFLKMIG ALDEKENLTD LGKLLSILPV DPKLGKMLIM GAIFRCFDPI LTIVSGLSVR DPFLLPQDKK DLALSAKLRF
0801: SAKDYSDHMA LVRAFEGWKD AEREGSAYEF CWRNFLSAQT LQAIHSLRKQ FNYILKEAGL VHDDLALNNK LSHNQSLVRA VICSGLFPGI ASVVHRETSM
0901: SFKTMDDGQV SLYANSVNSR FPTIPYPWLV FGEKVKVNAV LIRDSTGVPD SSLILFGGSL STGVQVGHLK MLDGYIDFFM DPNLAESYVK LKEELDKLLQ
1001: KKLEDPSMDI HKEGKYLMLA VQELVAGDQC EGRFVFGRDT KRPSQPQIGE NKHSKDGTNP KSLLQTLLMR AGHSPPKYKT KHLKTNEFRA LVEFKGMQFV
1101: GKPQRNKTLA EKDAAVEALA WLTHTSDNST GQHNEDADSP PDVTDNMLKL LGGRRRRSKG K
0101: LGILLANDSE QEIVSRDKRD RRDYEQISNL AKRMGLYSEI YGKVVVASKV PLPNYRPDLD DKRPQREVVL PLSLQRRVEG LLQEHLDSQQ LSSGKANECV
0201: ADSQPPKQTE ELPDENSDSF LDGSVMEKVL QRRSMRMRNM QRTWQESPEG RTMLEFRKTL PSFKDKERLL QAIARNQVIV VSGETGCGKT TQLPQYILES
0301: EIESGRGAFC NIICTQPRRI SAMAVSERVS AERGEPLGET VGFKVRLEGM RGKNTHLLFC TSGILLRRLL SDRNLNGVTH VFVDEIHERG MNEDFLIIVL
0401: KELLPRRPDL RLVLMSATLN AELFSNYYGG APTIHIPGFT HPVKAHFLED VLEITGYKLT SFNQVDDYGQ EKTWKTQKQL MPRKRKNQIT TLVEEALSKS
0501: NFESYNSRTR DSLSSWMPDC IGFNLIEAVL CHICRKERPG AVLVFLTGWD DIRSLSDQIK AHPLLGDPNR VLLLMCHGSM ATAEQRLIFE RAPPNIRKIV
0601: LATNMAEASI TINDVVFVVD CGKAKETTYD ALNNTPCLLP SWISQASARQ RRGRAGRLFP GECYHLYPKC VYDAFAEYQL PELLRTPLNS LCLQIKSLQV
0701: ESIAEFLSAA LQAPESLAVQ NAIGFLKMIG ALDEKENLTD LGKLLSILPV DPKLGKMLIM GAIFRCFDPI LTIVSGLSVR DPFLLPQDKK DLALSAKLRF
0801: SAKDYSDHMA LVRAFEGWKD AEREGSAYEF CWRNFLSAQT LQAIHSLRKQ FNYILKEAGL VHDDLALNNK LSHNQSLVRA VICSGLFPGI ASVVHRETSM
0901: SFKTMDDGQV SLYANSVNSR FPTIPYPWLV FGEKVKVNAV LIRDSTGVPD SSLILFGGSL STGVQVGHLK MLDGYIDFFM DPNLAESYVK LKEELDKLLQ
1001: KKLEDPSMDI HKEGKYLMLA VQELVAGDQC EGRFVFGRDT KRPSQPQIGE NKHSKDGTNP KSLLQTLLMR AGHSPPKYKT KHLKTNEFRA LVEFKGMQFV
1101: GKPQRNKTLA EKDAAVEALA WLTHTSDNST GQHNEDADSP PDVTDNMLKL LGGRRRRSKG K
Arabidopsis Description
ATP-dependent RNA helicase A-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF84]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.