Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G341800.1 | Wheat | nucleus | 97.03 | 96.49 |
| CDY51663 | Canola | nucleus | 4.74 | 80.95 |
| CDX91491 | Canola | nucleus | 4.65 | 79.37 |
| PGSC0003DMT400084916 | Potato | nucleus | 58.74 | 78.9 |
| CDY23338 | Canola | cytosol | 30.67 | 78.2 |
| Os06t0343100-01 | Rice | nucleus | 78.16 | 77.58 |
| EES15324 | Sorghum | nucleus | 76.39 | 76.75 |
| KRG97372 | Soybean | nucleus | 64.31 | 71.56 |
| CDX83624 | Canola | nucleus | 70.72 | 68.25 |
| GSMUA_Achr10P... | Banana | nucleus | 61.71 | 68.1 |
| CDY13640 | Canola | nucleus | 70.91 | 67.82 |
| VIT_08s0056g00470.t01 | Wine grape | nucleus | 71.56 | 65.53 |
| AT3G26560.1 | Thale cress | nucleus | 71.0 | 65.41 |
| Bra025211.1-P | Field mustard | nucleus | 71.0 | 65.24 |
| Bra040091.1-P | Field mustard | nucleus | 47.96 | 65.23 |
| Solyc01g110990.2.1 | Tomato | nucleus | 67.19 | 65.08 |
| TraesCS4B01G148500.1 | Wheat | nucleus | 74.44 | 64.91 |
| KRH05918 | Soybean | nucleus | 72.12 | 64.83 |
| KRH17401 | Soybean | nucleus | 72.4 | 64.75 |
| Solyc07g039550.2.1 | Tomato | nucleus | 71.28 | 64.45 |
| PGSC0003DMT400056692 | Potato | nucleus | 67.29 | 63.45 |
| Zm00001d031581_P002 | Maize | nucleus | 75.0 | 60.95 |
| TraesCS4B01G180200.1 | Wheat | cytosol | 32.06 | 47.85 |
| TraesCS3B01G165500.1 | Wheat | nucleus | 29.93 | 45.93 |
| TraesCS7B01G060800.1 | Wheat | plastid | 28.44 | 42.92 |
| TraesCS4B01G075500.1 | Wheat | nucleus | 25.93 | 39.57 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 37.64 | 38.72 |
| TraesCS1B01G254900.1 | Wheat | nucleus | 37.27 | 37.83 |
| TraesCS1B01G398400.1 | Wheat | cytosol | 13.85 | 37.72 |
| TraesCS1B01G398100.1 | Wheat | cytosol | 22.12 | 34.54 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 35.5 | 30.25 |
| TraesCS1B01G168700.3 | Wheat | nucleus | 24.72 | 25.8 |
| TraesCS5B01G392800.1 | Wheat | nucleus | 23.14 | 21.65 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 24.81 | 20.76 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 23.7 | 20.45 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 24.81 | 20.24 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 19.7 | 17.74 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 21.38 | 16.11 |
| TraesCS3B01G129700.1 | Wheat | nucleus | 22.68 | 15.01 |
| TraesCS5B01G080500.1 | Wheat | nucleus | 18.31 | 14.89 |
| TraesCS2B01G190100.1 | Wheat | nucleus | 22.96 | 14.24 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:2.40.50.140 | Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR003029 | InterPro:IPR014001 | InterPro:NA-bd_OB-fold | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00575 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 |
| PFscan:PS50126 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF120 | InterPro:S1_dom |
| InterPro:S1_domain | SMART:SM00316 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF50249 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS7B01G245800 | EnsemblPlants:TraesCS7B01G245800.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr7B:-:454242577..454245807
Molecular Weight (calculated)
120119.0 Da
IEP (calculated)
6.738
GRAVY (calculated)
-0.407
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTKASPADAA SEGIRRLTYL SLVSKVSSEL EAHLGDVQRN VAEFIVHLGR ASPSVAEFDA KLKDHEFVVP DYLARTLHTV IRAIPDAAPA PAPRNPTAAP
0101: APAPRKPTAD GDEEEEDEGE DGAGGPELHQ VCHGTVIRVV DAGCFVRLDG ARGREGLVHT SRMPAAVKRG QEVFVKVVSV QWGNLELSMV DIDQETGRAL
0201: PPPRRDGQDA VRRANRSAGP AGTSGKRIGL SGIVIEEDGA RPAPRRPVRR MSSPERWELK QLIASGALNV RDCPAIDDDD GGIHYQEEAE EVEEELEIEL
0301: NEDEPPFLSG HGRSSIDLSP VRISKNPEGS LSRAAALQTA LFKERRDIRS QEQRALLDSI PKDLNRPWED PLPDAGGRCL AQELRGAGLS AQSMPEWKKR
0401: AYGKTGTFGK RSSLPIQDQR QQLPIYRLKN ELVKALHHHQ VLVVIGETGS GKTTQVTQYL AEAGYTEAGK IACTQPRRVA AQSVAKRVAE EFGCPLGEEV
0501: GYSIRFDDRT GPDTVIKYMT DGMLLREIMV DKNLSCYSVV MLDEAHERTI YTDILFGLLK QLIRRRTDLK LIVTSATLDA EKFSRYFFNC NIFTIPGRTF
0601: PVEILYAKEP QSDYMDAALI TVLQIHLSQP EGDILLFLTG QEEIDQACNS LHERMKVLGN DVPELLVNPV YSALPTEMQS KIFEPAPLGK RKVIVATNIA
0701: EASITIDGIY YVVDPGFAKL NVYNPKRGLD SLVITPISQA SAKQRAGRAG RTGPGKCYRL YTESAYRNEM PATTIPEIQR INLGWTVLNM KAMGINELVS
0801: FDFMDPPAPQ ALISAMEQLY SLGALDEEGL LTKLGRKMAE FPQEPPLSKM LLASVDLGCS DEIVTIIAMI QTGNIFYRPR EKQDQADRKR GNFFQPEGDH
0901: ITLLTVYQAW KAKQFSGPWC FENFLQITSL RRAQDVRKQL LEIMDRYRLD VVSAGNDLTK VRRAIAAGFF FNSAKKDPQG GYRTLADHQQ VYIHPSSALF
1001: HQQPEWVIYN EIVMTTKEYM REVTAINPAW LVELAPRFYR SVDSAKMSKR KRQERIEPLY DRYNEPNSWR LSKRRG
0101: APAPRKPTAD GDEEEEDEGE DGAGGPELHQ VCHGTVIRVV DAGCFVRLDG ARGREGLVHT SRMPAAVKRG QEVFVKVVSV QWGNLELSMV DIDQETGRAL
0201: PPPRRDGQDA VRRANRSAGP AGTSGKRIGL SGIVIEEDGA RPAPRRPVRR MSSPERWELK QLIASGALNV RDCPAIDDDD GGIHYQEEAE EVEEELEIEL
0301: NEDEPPFLSG HGRSSIDLSP VRISKNPEGS LSRAAALQTA LFKERRDIRS QEQRALLDSI PKDLNRPWED PLPDAGGRCL AQELRGAGLS AQSMPEWKKR
0401: AYGKTGTFGK RSSLPIQDQR QQLPIYRLKN ELVKALHHHQ VLVVIGETGS GKTTQVTQYL AEAGYTEAGK IACTQPRRVA AQSVAKRVAE EFGCPLGEEV
0501: GYSIRFDDRT GPDTVIKYMT DGMLLREIMV DKNLSCYSVV MLDEAHERTI YTDILFGLLK QLIRRRTDLK LIVTSATLDA EKFSRYFFNC NIFTIPGRTF
0601: PVEILYAKEP QSDYMDAALI TVLQIHLSQP EGDILLFLTG QEEIDQACNS LHERMKVLGN DVPELLVNPV YSALPTEMQS KIFEPAPLGK RKVIVATNIA
0701: EASITIDGIY YVVDPGFAKL NVYNPKRGLD SLVITPISQA SAKQRAGRAG RTGPGKCYRL YTESAYRNEM PATTIPEIQR INLGWTVLNM KAMGINELVS
0801: FDFMDPPAPQ ALISAMEQLY SLGALDEEGL LTKLGRKMAE FPQEPPLSKM LLASVDLGCS DEIVTIIAMI QTGNIFYRPR EKQDQADRKR GNFFQPEGDH
0901: ITLLTVYQAW KAKQFSGPWC FENFLQITSL RRAQDVRKQL LEIMDRYRLD VVSAGNDLTK VRRAIAAGFF FNSAKKDPQG GYRTLADHQQ VYIHPSSALF
1001: HQQPEWVIYN EIVMTTKEYM REVTAINPAW LVELAPRFYR SVDSAKMSKR KRQERIEPLY DRYNEPNSWR LSKRRG
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.