Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G158200.1 | Wheat | nucleus | 98.87 | 98.87 |
| Os02t0301500-01 | Rice | nucleus | 43.35 | 97.99 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 97.65 | 97.02 |
| TraesCS4D01G147900.1 | Wheat | nucleus | 99.11 | 94.88 |
| CDY51663 | Canola | nucleus | 4.78 | 93.65 |
| PGSC0003DMT400084916 | Potato | nucleus | 59.97 | 92.38 |
| CDX91491 | Canola | nucleus | 4.7 | 92.06 |
| CDY23338 | Canola | cytosol | 30.39 | 88.86 |
| Zm00001d015893_P001 | Maize | nucleus, plasma membrane | 88.74 | 88.59 |
| EER95349 | Sorghum | nucleus | 88.98 | 88.41 |
| GSMUA_Achr10P... | Banana | nucleus | 68.96 | 87.28 |
| VIT_08s0056g00470.t01 | Wine grape | nucleus | 79.25 | 83.23 |
| KRH05918 | Soybean | nucleus | 79.66 | 82.12 |
| KRH17401 | Soybean | nucleus | 79.9 | 81.96 |
| KRG97372 | Soybean | nucleus | 63.94 | 81.59 |
| Solyc07g039550.2.1 | Tomato | nucleus | 78.61 | 81.51 |
| CDX83624 | Canola | nucleus | 73.5 | 81.35 |
| Solyc01g110990.2.1 | Tomato | nucleus | 73.18 | 81.28 |
| CDY13640 | Canola | nucleus | 73.66 | 80.8 |
| AT3G26560.1 | Thale cress | nucleus | 76.34 | 80.65 |
| PGSC0003DMT400056692 | Potato | nucleus | 73.66 | 79.67 |
| Bra025211.1-P | Field mustard | nucleus | 74.72 | 78.74 |
| Bra040091.1-P | Field mustard | nucleus | 49.51 | 77.24 |
| TraesCS7B01G245800.1 | Wheat | nucleus | 64.91 | 74.44 |
| TraesCS4B01G180200.1 | Wheat | cytosol | 29.34 | 50.21 |
| TraesCS3B01G165500.1 | Wheat | nucleus | 26.74 | 47.08 |
| TraesCS7B01G060800.1 | Wheat | plastid | 25.85 | 44.74 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 36.06 | 42.54 |
| TraesCS1B01G398400.1 | Wheat | cytosol | 13.13 | 41.01 |
| TraesCS4B01G075500.1 | Wheat | nucleus | 23.34 | 40.85 |
| TraesCS1B01G254900.1 | Wheat | nucleus | 34.77 | 40.47 |
| TraesCS1B01G398100.1 | Wheat | cytosol | 19.29 | 34.54 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 34.12 | 33.33 |
| TraesCS1B01G168700.3 | Wheat | nucleus | 22.29 | 26.67 |
| TraesCS5B01G392800.1 | Wheat | nucleus | 21.39 | 22.96 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 21.64 | 21.41 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 21.96 | 21.07 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 21.88 | 20.47 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 17.75 | 18.33 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 19.53 | 16.88 |
| TraesCS3B01G129700.1 | Wheat | nucleus | 19.69 | 14.94 |
| TraesCS5B01G080500.1 | Wheat | nucleus | 15.32 | 14.29 |
| TraesCS2B01G190100.1 | Wheat | nucleus | 19.85 | 14.13 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:2.40.50.140 | Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR003029 | InterPro:IPR014001 | InterPro:NA-bd_OB-fold | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00575 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 |
| PFscan:PS50126 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF120 | InterPro:S1_dom |
| InterPro:S1_domain | SMART:SM00316 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF50249 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4B01G148500 | EnsemblPlants:TraesCS4B01G148500.1 | TIGR:cd00046 | TIGR:cd00079 | TIGR:cd05684 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:214923148..214927293
Molecular Weight (calculated)
139655.0 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.669
Length
1234 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPPAAEGPG DDGLRKLEYL SLVSKVCSEL ETHIGVGDKV LAEFITELGR DAPSVADFDA KLKANGADLP DYFVRTLLTI IHAILPPPSH NPSSAASQSN
0101: SKYRALSRPD DADRARELRL ELERDANAAA ATTPAPSRDR SRDDRSRDRD HDRTRDERGR DRDHDRSRDR DRGRGDRSHN RDRAHDDRGQ DRNHDRGREH
0201: DHGWDRDRDR GRDRDREGDR DGNGRRDQDR LQQRDRDTGK AHGRSRRYVD EEDGQQERAG GRKTENTMTN SSGEPELYQV YRGRVTRVMD TGCFVKLEDV
0301: RGGREGLVHV SQMASRRVAN AKEVVKRDQE VFVKVVSVKG DKLSLSLRDV DQDTGKDLLP MQRGVEDAPR TNPSVGSAAA AGPGRRLGLS GIVITEEDEV
0401: APISRRPLKR MSSPERWEAK QLIASGVLDV RDYPQFDEDG DGMLYQEEGA EEELEIELNE DEPEFLQGQS RFSIDMSPVK IFKNPEGSLS RAAALQTALI
0501: KERREVREQE QRAMLDSIPK DLNRPWEDPM PDTGERHLAQ ELRGVGLSAY DMPEWKKEAY GKALTFGQRS KLSIQDQRQT LPIYKLKKEL IQAVHDNQVL
0601: VVIGETGSGK TTQVTQYLAE AGYTTRGKIG CTQPRRVAAM SVAKRVAEEF GCRLGEEVGY AIRFEDCTGP ETVIKYMTDG MLLREILVDE NLSQYSVVML
0701: DEAHERTIHT DVLFGLLKQL VKRRPDMRLI VTSATLDAEK FSGYFFNCNI FTIPGRTFPV EILYTKQPES DYLDAALITV LQIHLTEPEG DILVFLTGQE
0801: EIDHACQCLY ERMKGLGKDV PELIILPVYS ALPSEMQSKI FEPAPPGKRK VVVATNIAEA SLTIDGIYYV IDPGFAKINV YNSKQGLDSL VITPISQASA
0901: KQRAGRAGRT GPGKCYRLYT ESAYRNEMSP TTIPEIQRIN LGSTVLNMKA MGINDLLSFD FMDPPAPQAL ISAMEQLYSL GALDEEGLLT KLGRKMAEFP
1001: LDPPLSKMLL ASVDLGCSDE ILTIIAMIQT GNIFYRPREK QAQADQKRAK FFQPEGDHLT LLAVYEAWKA KNFSGPWCFE NFVQSRSLRR AQDVRKQLLT
1101: IMDRYKLDVV AAGKNFTKIR KAITAGFFFH AARKDPQEGY RTLVENQPVY IHPSSALFQR QPDWVIYHEL VMTTKEYMRE VTVVDPKWLV ELAPRFYKGA
1201: DPTKMSKRKR QERIEPLYDR YHEPNSWRLS KRRA
0101: SKYRALSRPD DADRARELRL ELERDANAAA ATTPAPSRDR SRDDRSRDRD HDRTRDERGR DRDHDRSRDR DRGRGDRSHN RDRAHDDRGQ DRNHDRGREH
0201: DHGWDRDRDR GRDRDREGDR DGNGRRDQDR LQQRDRDTGK AHGRSRRYVD EEDGQQERAG GRKTENTMTN SSGEPELYQV YRGRVTRVMD TGCFVKLEDV
0301: RGGREGLVHV SQMASRRVAN AKEVVKRDQE VFVKVVSVKG DKLSLSLRDV DQDTGKDLLP MQRGVEDAPR TNPSVGSAAA AGPGRRLGLS GIVITEEDEV
0401: APISRRPLKR MSSPERWEAK QLIASGVLDV RDYPQFDEDG DGMLYQEEGA EEELEIELNE DEPEFLQGQS RFSIDMSPVK IFKNPEGSLS RAAALQTALI
0501: KERREVREQE QRAMLDSIPK DLNRPWEDPM PDTGERHLAQ ELRGVGLSAY DMPEWKKEAY GKALTFGQRS KLSIQDQRQT LPIYKLKKEL IQAVHDNQVL
0601: VVIGETGSGK TTQVTQYLAE AGYTTRGKIG CTQPRRVAAM SVAKRVAEEF GCRLGEEVGY AIRFEDCTGP ETVIKYMTDG MLLREILVDE NLSQYSVVML
0701: DEAHERTIHT DVLFGLLKQL VKRRPDMRLI VTSATLDAEK FSGYFFNCNI FTIPGRTFPV EILYTKQPES DYLDAALITV LQIHLTEPEG DILVFLTGQE
0801: EIDHACQCLY ERMKGLGKDV PELIILPVYS ALPSEMQSKI FEPAPPGKRK VVVATNIAEA SLTIDGIYYV IDPGFAKINV YNSKQGLDSL VITPISQASA
0901: KQRAGRAGRT GPGKCYRLYT ESAYRNEMSP TTIPEIQRIN LGSTVLNMKA MGINDLLSFD FMDPPAPQAL ISAMEQLYSL GALDEEGLLT KLGRKMAEFP
1001: LDPPLSKMLL ASVDLGCSDE ILTIIAMIQT GNIFYRPREK QAQADQKRAK FFQPEGDHLT LLAVYEAWKA KNFSGPWCFE NFVQSRSLRR AQDVRKQLLT
1101: IMDRYKLDVV AAGKNFTKIR KAITAGFFFH AARKDPQEGY RTLVENQPVY IHPSSALFQR QPDWVIYHEL VMTTKEYMRE VTVVDPKWLV ELAPRFYKGA
1201: DPTKMSKRKR QERIEPLYDR YHEPNSWRLS KRRA
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.