Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g017700.1.1 | Tomato | nucleus | 94.4 | 87.58 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 34.67 | 77.66 |
| GSMUA_Achr4P23370_001 | Banana | nucleus | 62.29 | 68.27 |
| Zm00001d049980_P001 | Maize | plasma membrane | 55.11 | 64.9 |
| PGSC0003DMT400063370 | Potato | nucleus | 78.71 | 61.62 |
| AT4G16680.2 | Thale cress | nucleus | 59.0 | 60.93 |
| CDY40514 | Canola | nucleus | 59.12 | 56.45 |
| CDY60185 | Canola | nucleus | 58.88 | 56.34 |
| EES02741 | Sorghum | nucleus | 70.68 | 55.54 |
| Bra038498.1-P | Field mustard | nucleus | 60.83 | 55.49 |
| KXG30390 | Sorghum | nucleus | 70.56 | 55.45 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 70.44 | 55.35 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 70.19 | 55.16 |
| PGSC0003DMT400038620 | Potato | cytosol, nucleus, plastid | 22.51 | 53.01 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 67.4 | 51.3 |
| PGSC0003DMT400023284 | Potato | nucleus | 42.7 | 48.55 |
| PGSC0003DMT400046188 | Potato | nucleus | 39.05 | 46.52 |
| PGSC0003DMT400084916 | Potato | nucleus | 44.28 | 45.44 |
| PGSC0003DMT400009842 | Potato | mitochondrion | 20.07 | 43.77 |
| PGSC0003DMT400039875 | Potato | nucleus | 41.0 | 36.51 |
| PGSC0003DMT400056692 | Potato | nucleus | 45.62 | 32.87 |
| PGSC0003DMT400018531 | Potato | nucleus | 42.94 | 27.47 |
| PGSC0003DMT400055058 | Potato | nucleus | 27.13 | 26.11 |
| PGSC0003DMT400055091 | Potato | mitochondrion | 27.74 | 19.59 |
| PGSC0003DMT400000297 | Potato | nucleus | 31.27 | 19.24 |
| PGSC0003DMT400041805 | Potato | nucleus | 27.13 | 13.75 |
| PGSC0003DMT400060759 | Potato | nucleus | 27.49 | 13.07 |
| PGSC0003DMT400063366 | Potato | plastid | 0.49 | 2.8 |
| PGSC0003DMT400041647 | Potato | cytosol | 0.24 | 0.54 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| UniProt:M0ZQC3 | InterPro:P-loop_NTPase | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | EnsemblPlantsGene:PGSC0003DMG400002239 |
| PGSC:PGSC0003DMG400002239 | EnsemblPlants:PGSC0003DMT400005723 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 |
| PANTHER:PTHR18934:SF117 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI000296E2A7 |
| SEG:seg | : | : | : | : | : |
Description
EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase [Source:PGSC_GENE;Acc:PGSC0003DMG400002239]
Coordinates
chr12:-:11429705..11432173
Molecular Weight (calculated)
93462.0 Da
IEP (calculated)
7.464
GRAVY (calculated)
-0.505
Length
822 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSSPTLES RKRKTAGEDE DEDVKFKGKR TEQVEKLRKV SRQEYLKNRE KKKLKQLRDD IEDEQFLFEK IEKLSEPEKR EHLYKQQIVE LVSKEQQCDD
101: AGEEREIHPQ QAWEENQISN AKLNFGSKDR KQKDYQFVFE DQIEFIKSTI IDSDSDVDNE KLQCTRNSKL NEDRKDLPIY PYKDALLQAV HDHQVLIIVG
201: ETGSGKTTQI PQYLHEAGFT RSGGKMIGCT QPRRVAAMRV AARVSHEMGV KLGHEVGYSI RFEDCTSEKT ILKYMTDGML LREFLTEPDL ASYSVIMIDE
301: AHERTLSTDI LFGLIKDVAR ARPRLKLLIS SATLDAKKFS DYFDRAPIFN IPGRRFPVEK HHSKAPISDY LDAAVVTALQ IHATQPQGDG DILIFLTGQE
401: EIETAENIIN RRIRALGTKI AELITCPIYA NLPTELQAKI FEPTPEGVRK VVLATNIAET SLTIDGIKYV IDTGFCKINC YNPRTGTESL MVAPISKASA
501: NQRAGRSGRT GPGKCFRLYT EHSYMNDLED NTIPEIQRTN LANVVLLLKS VGITDLLNFD FMDPPPAEAL LKALELLFAL GSLDKDGKLT KVGERMSEFP
601: LDPMLSKMIV ASDKYKCSAE IISIAAMLSV GNSIFYRPKD RQVQADNAWM NFHVGNVGDH IALLKVYNSW KETKFSTQWC YENYIQVRSM KKARDIRDQL
701: EGRLERVGID LTSNVNDLEA IKKSIISGFF PHSARLQKNG AYRTVKHPQT GHIHPSSGLS QVLPRWVVYH ELVLTTKEYM RQVSELKPEW LVEVAPHYYQ
801: LKDVEDSSSK KMPRGIGLAS SK
101: AGEEREIHPQ QAWEENQISN AKLNFGSKDR KQKDYQFVFE DQIEFIKSTI IDSDSDVDNE KLQCTRNSKL NEDRKDLPIY PYKDALLQAV HDHQVLIIVG
201: ETGSGKTTQI PQYLHEAGFT RSGGKMIGCT QPRRVAAMRV AARVSHEMGV KLGHEVGYSI RFEDCTSEKT ILKYMTDGML LREFLTEPDL ASYSVIMIDE
301: AHERTLSTDI LFGLIKDVAR ARPRLKLLIS SATLDAKKFS DYFDRAPIFN IPGRRFPVEK HHSKAPISDY LDAAVVTALQ IHATQPQGDG DILIFLTGQE
401: EIETAENIIN RRIRALGTKI AELITCPIYA NLPTELQAKI FEPTPEGVRK VVLATNIAET SLTIDGIKYV IDTGFCKINC YNPRTGTESL MVAPISKASA
501: NQRAGRSGRT GPGKCFRLYT EHSYMNDLED NTIPEIQRTN LANVVLLLKS VGITDLLNFD FMDPPPAEAL LKALELLFAL GSLDKDGKLT KVGERMSEFP
601: LDPMLSKMIV ASDKYKCSAE IISIAAMLSV GNSIFYRPKD RQVQADNAWM NFHVGNVGDH IALLKVYNSW KETKFSTQWC YENYIQVRSM KKARDIRDQL
701: EGRLERVGID LTSNVNDLEA IKKSIISGFF PHSARLQKNG AYRTVKHPQT GHIHPSSGLS QVLPRWVVYH ELVLTTKEYM RQVSELKPEW LVEVAPHYYQ
801: LKDVEDSSSK KMPRGIGLAS SK
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEGGV DQEKRFSVAV
0301: QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV RRSLPIYTYR
0401: DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM TDGMLLRELL
0501: GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI VTILTIHVRE
0601: PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK MKSYNPRTGM
0701: ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL FALGALNKLG
0801: ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST QWCYENYIQV
0901: RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK EYMRQVTELK
1001: PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEGGV DQEKRFSVAV
0301: QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV RRSLPIYTYR
0401: DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM TDGMLLRELL
0501: GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI VTILTIHVRE
0601: PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK MKSYNPRTGM
0701: ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL FALGALNKLG
0801: ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST QWCYENYIQV
0901: RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK EYMRQVTELK
1001: PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.