Factsheet for Solyc10g044990.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G080070.2	Barley	cytosol	16.34	26.04
GSMUA_Achr8P13090_001	Banana	cytosol	32.03	20.25
Solyc01g111700.1.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	51.63	16.32
Solyc01g111710.2.1	Tomato	nucleus	39.87	12.53
GSMUA_Achr5P18970_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	37.91	10.55
TraesCS5D01G340000.1	Wheat	cytosol, nucleus, plastid	33.33	10.28
Zm00001d053232_P005	Maize	cytosol, nucleus, plastid	33.99	10.24
EES14113	Sorghum	cytosol, nucleus, plastid	32.68	10.08
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	32.03	10.04
TraesCS4A01G044600.1	Wheat	golgi	32.03	10.0
TraesCS5A01G335200.1	Wheat	golgi	32.03	9.88
HORVU5Hr1G084540.1	Barley	cytosol, nucleus, plastid	32.03	9.88
Os09t0541900-01	Rice	cytosol, nucleus, plastid	31.37	9.86
TraesCS4D01G265700.1	Wheat	unclear	31.37	9.84
Os08t0550100-01	Rice	plasma membrane	30.72	9.67
TraesCS4B01G265700.1	Wheat	plastid	30.72	9.63
TraesCS4B01G265800.1	Wheat	plastid	30.72	9.63
Zm00001d032010_P007	Maize	cytosol, nucleus, plastid	32.68	9.58
HORVU4Hr1G071480.8	Barley	plastid	30.72	9.49
Bra012219.1-P	Field mustard	cytosol	3.92	2.8
CDY01387	Canola	cytosol	3.92	2.8
GSMUA_Achr8P13080_001	Banana	cytosol, extracellular, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc10g044990.1.1	EnsemblPlantsGene:Solyc10g044990.1	GO:GO:0000338	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008180
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	PANTHER:PTHR10758	PANTHER:PTHR10758:SF7	UniParc:UPI000276B3D6
UniProt:K4CZL9	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr10:+:29331844..29333719

Molecular Weight (calculated)

16960.3 Da

IEP (calculated)

6.790

GRAVY (calculated)

0.019

Length

153 amino acids

Sequence
(BLAST)

001: MGEQQHQQPA IFLAPPSIIF SFPAAPTMTS NTKYEEAAPM QASSPPEFAS LIEGRAYTSE VQKIYMAMRL TMELRSKIKA SILSAFLNYV FPSGSEFHTR
101: LSSYLPHGKA CSSVSIVLQK SKYSITVDVL ASGLYFYYSL SFELADDLSY IQG

Best Arabidopsis Sequence Match ( AT1G20200.1 )
(BLAST)

001: MTQDVEMKDN NTPSQSIISS STSTMQNLKE IAALIDTGSY TKEVRRIARA VRLTIGLRQK LTGSVLSSFL DFALVPGSEA HSRLSSFVPK GDEHDMEVDT
101: ASSATQAAPS KHLPAELEIY CYFIVLLFLI DQKKYNEAKA CSSASIARLK NVNRRTIDVI ASRLYFYYSL SYEQTGDLAE IRGTLLALHH SATLRHDELG
201: QETLLNLLLR NYLHYNLYDQ AEKLRSKAPR FEAHSNQQFC RYLFYLGKIR TIQLEYTDAK ESLLQAARKA PIAALGFRIQ CNKWAILVRL LLGEIPERSI
301: FTQKGMEKAL RPYFELTNAV RIGDLELFRT VQEKFLDTFA QDRTHNLIVR LRHNVIRTGL RNISISYSRI SLPDVAKKLR LNSENPVADA ESIVAKAIRD
401: GAIDATIDHK NGCMVSKETG DIYSTNEPQT AFNSRIAFCL NMHNEAVRAL RFPPNTHKEK ESDEKRRERK QQEEELAKHM AEEDDDDF

Arabidopsis Description

RPN3A26S proteasome non-ATPase regulatory subunit 3 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.