Factsheet for Solyc10g074510.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g112150.2.1	Tomato	plastid	78.69	7.74
Solyc01g091300.2.1	Tomato	nucleus	18.03	2.1
TraesCS2D01G259600.1	Wheat	cytosol	16.39	1.76
EES13788	Sorghum	cytosol	16.39	1.76
TraesCS2B01G277800.2	Wheat	cytosol	16.39	1.76
TraesCS2A01G264300.1	Wheat	cytosol	16.39	1.76
Solyc04g064820.2.1	Tomato	cytosol, nucleus	16.39	1.76
GSMUA_Achr10P...	Banana	cytosol	14.75	1.59
HORVU2Hr1G062800.7	Barley	cytosol, plastid	16.39	1.59
Os02t0437800-02	Rice	cytosol, plasma membrane	14.75	1.59
Zm00001d049522_P001	Maize	cytosol, plasma membrane	16.39	1.58
Solyc08g079520.2.1	Tomato	nucleus	11.48	1.05
Solyc01g091290.2.1	Tomato	cytosol, unclear	1.64	0.54
Solyc10g074520.1.1	Tomato	cytosol	0.0	0.0
CDY71507	Canola	cytosol, golgi	0.0	0.0
VIT_03s0038g00020.t01	Wine grape	cytosol	0.0	0.0
CDX79223	Canola	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc10g074510.1.1	EnsemblPlantsGene:Solyc10g074510.1	Gene3D:3.40.50.1910	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150
GO:GO:0009987	GO:GO:0016192	InterPro:IPR027482	InterPro:Sec-1-like_dom2	InterPro:Sec1-like	InterPro:Sec1-like_sf
PANTHER:PTHR11679	PANTHER:PTHR11679:SF60	PFAM:PF00995	SUPFAM:SSF56815	UniParc:UPI00027698C2	UniProt:K4D1P3
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:58058440..58058625

Molecular Weight (calculated)

6666.1 Da

IEP (calculated)

7.609

GRAVY (calculated)

-0.052

Length

61 amino acids

Sequence
(BLAST)

1: MICGGNYVEY GSLQEFAHRQ QPVKHIIYGT TKFLTGGEFI EQLGVLGQKM GLGSTIAVPN H

Best Arabidopsis Sequence Match ( AT2G17980.1 )
(BLAST)

001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH

Arabidopsis Description

SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.