Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 3
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g112150.2.1 | Tomato | plastid | 81.79 | 39.84 |
| CDX79223 | Canola | cytosol, plastid | 4.3 | 19.7 |
| EES13788 | Sorghum | cytosol | 16.89 | 8.99 |
| GSMUA_Achr10P... | Banana | cytosol | 16.23 | 8.67 |
| Solyc04g064820.2.1 | Tomato | cytosol, nucleus | 16.23 | 8.63 |
| Os02t0437800-02 | Rice | cytosol, plasma membrane | 15.89 | 8.47 |
| TraesCS2D01G259600.1 | Wheat | cytosol | 15.56 | 8.29 |
| TraesCS2B01G277800.2 | Wheat | cytosol | 15.56 | 8.29 |
| TraesCS2A01G264300.1 | Wheat | cytosol | 15.56 | 8.29 |
| Zm00001d049522_P001 | Maize | cytosol, plasma membrane | 17.22 | 8.21 |
| Solyc01g091300.2.1 | Tomato | nucleus | 14.24 | 8.19 |
| HORVU2Hr1G062800.7 | Barley | cytosol, plastid | 15.56 | 7.48 |
| Solyc08g079520.2.1 | Tomato | nucleus | 15.89 | 7.21 |
| VIT_03s0038g00020.t01 | Wine grape | cytosol | 1.32 | 5.48 |
| CDY71507 | Canola | cytosol, golgi | 4.3 | 4.38 |
| Solyc01g091290.2.1 | Tomato | cytosol, unclear | 0.99 | 1.61 |
| Solyc10g074510.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc10g074520.1.1 | EnsemblPlantsGene:Solyc10g074520.1 | Gene3D:1.25.40.60 | Gene3D:3.40.50.1910 | GO:GO:0006810 | GO:GO:0006904 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016192 | InterPro:IPR027482 | InterPro:Sec-1-like_dom2 | InterPro:Sec1-like |
| InterPro:Sec1-like_sf | ncoils:Coil | PANTHER:PTHR11679 | PANTHER:PTHR11679:SF60 | PFAM:PF00995 | SUPFAM:SSF56815 |
| UniParc:UPI00027698C3 | UniProt:K4D1P4 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr10:-:58058772..58060706
Molecular Weight (calculated)
33693.1 Da
IEP (calculated)
5.005
GRAVY (calculated)
-0.252
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTSFPMHP TFARGSRFRV YCNIAKVHDQ YLEFATLEDN LFSLAYKNCY LQLNDPSAGD KEIDEIVEKF VSGLFSVLAT LVVVPVIRCP GGGPAEMVAS
101: LLDQRLRDHL LAKNNLFSEG ANFTSSFQRL VLCLFDRNFE LSVMANWSLQ FPEVALEIES QLGKYKKDVE EVNKRTGGSG GTEFDGTDLV GNTKHLMNAV
201: NSQPEWTERK QVIDKHTNIA TSLLGEIKER SLDSYAKKES DMLVRGGIDR NELLGVLKGK GSKADKLRFA IIYLISTESM PQSEVETIEA ALRESEVDTS
301: AF
101: LLDQRLRDHL LAKNNLFSEG ANFTSSFQRL VLCLFDRNFE LSVMANWSLQ FPEVALEIES QLGKYKKDVE EVNKRTGGSG GTEFDGTDLV GNTKHLMNAV
201: NSQPEWTERK QVIDKHTNIA TSLLGEIKER SLDSYAKKES DMLVRGGIDR NELLGVLKGK GSKADKLRFA IIYLISTESM PQSEVETIEA ALRESEVDTS
301: AF
001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
Arabidopsis Description
SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.