Factsheet for TraesCS5A01G503000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G177800.1	Wheat	mitochondrion	95.8	95.8
TraesCSU01G147800.1	Wheat	mitochondrion	94.96	94.96
TraesCS6B01G338300.1	Wheat	mitochondrion	94.68	94.68
TraesCS3B01G516800.1	Wheat	mitochondrion	94.68	93.63
HORVU0Hr1G011520.1	Barley	mitochondrion	93.28	93.28
TraesCS2B01G283500.1	Wheat	mitochondrion	94.12	93.07
HORVU4Hr1G059510.1	Barley	mitochondrion	19.33	88.46
BAV58141	Barley	mitochondrion	94.4	87.99
TraesCS6D01G092500.1	Wheat	cytosol	88.24	87.26
BAC19883	Rice	mitochondrion	85.71	86.93
GRMZM5G849223_P01	Maize	plastid	86.27	86.03
VIT_00s0396g00050.t01	Wine grape	mitochondrion	75.63	74.59
Solyc01g017630.1.1	Tomato	cytosol	22.41	70.8
CDY45552	Canola	cytosol	71.71	70.72
ATMG00290.1	Thale cress	cytosol	70.87	69.89
AT2G07734.1	Thale cress	cytosol	70.87	69.89
PGSC0003DMT400083810	Potato	cytosol	34.45	69.1
Zm00001d004058_P001	Maize	cytosol	83.47	68.98
Solyc10g045740.1.1	Tomato	cytosol, mitochondrion	16.25	59.18
Solyc11g030940.1.1	Tomato	cytosol, plastid	27.73	57.56
OQU81276	Sorghum	cytosol	19.61	52.63

Protein Annotations

EnsemblPlants:TraesCS5A01G503000.1	EnsemblPlantsGene:TraesCS5A01G503000	Gene3D:3.10.290.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR002942	InterPro:IPR036986	InterPro:Ribosomal_S4/S9	InterPro:S4_RNA-bd	InterPro:S4_RNA-bd_sf
PANTHER:PTHR11831	PANTHER:PTHR11831:SF12	PFAM:PF01479	PFscan:PS50889	SEG:seg	SMART:SM00363
SUPFAM:SSF55174	TIGR:cd00165	MapMan:17.7.1.2.3	:	:	:

Description

No Description!

Coordinates

chr5A:-:667848083..667849156

Molecular Weight (calculated)

42060.5 Da

IEP (calculated)

11.654

GRAVY (calculated)

-0.629

Length

357 amino acids

Sequence
(BLAST)

001: MQALRFKTCH LLPGNVRNRE LSLIQRRILR RLSNKRRSIK RNLSHRENLN SNIKSQTTRK LYLYYGDLPI REMHRGRERT SYIPFLLNQE TRSDVIPVRL
101: HFSDTLPQAR QPISHRRVCL NNGLVTITHL KVSHGDLISF KVNDARTRGF EIRRSFYIDI SVGKIIGKFI SAISVGKRRG KFLPARIWRR TKEEWFCLLT
201: TQRGCRLLLK SKELQKLRSY MQEEDFERTK KFGSAKVCLG SFFAEHNRMK RNLFHFKYFF LLKRGKEKNR NLPTRTISPF VEKSSLYSNL TYCSGSPFTR
301: KIRIKRIELP THYPEVNHRT LKSVVSYGPN IGHIPHDIRL KDPSLPLRSG NGRGQNI

Best Arabidopsis Sequence Match ( AT2G07734.1 )
(BLAST)

001: MWLLKKLIQR DIDLSPLRFQ TCRLLSGNVR NRELTIIQRR ILRRLRNRKR SIKKRKIYPK KYLTSYIQLQ TTRKLPLFHG DLPITEMHRG TKRTSYIPFP
101: LNPETRFDVI PLRLHFLETI PQARQPISHR RVCVNKGMVS ITHFKLSHGD IISFQENNAI IRGEEIRRSF YKEISVEKII GKLLHQPLRM WRRSKTEWFH
201: LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKDKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP
301: HKLTMKRRIK RIELPTHYSE VNHRTPKAVV SYGPNIGHIP HDIRLKDPNL PLRSRNGRGQ NI

Arabidopsis Description

Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [Source:TAIR;Acc:AT2G07734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.