Factsheet for HORVU4Hr1G059510.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G023940.1	Barley	mitochondrion, peroxisome	91.03	35.5
Solyc11g030940.1.1	Tomato	cytosol, plastid	52.56	23.84
BAC19883	Rice	mitochondrion	93.59	20.74
HORVU0Hr1G011520.1	Barley	mitochondrion	94.87	20.73
TraesCSU01G177800.1	Wheat	mitochondrion	94.87	20.73
TraesCS6B01G338300.1	Wheat	mitochondrion	93.59	20.45
TraesCSU01G147800.1	Wheat	mitochondrion	93.59	20.45
GRMZM5G849223_P01	Maize	plastid	93.59	20.39
TraesCS2B01G283500.1	Wheat	mitochondrion	92.31	19.94
TraesCS3B01G516800.1	Wheat	mitochondrion	91.03	19.67
TraesCS5A01G503000.1	Wheat	mitochondrion	88.46	19.33
BAV58141	Barley	mitochondrion	94.87	19.32
VIT_00s0396g00050.t01	Wine grape	mitochondrion	74.36	16.02
TraesCS6D01G092500.1	Wheat	cytosol	73.08	15.79
Zm00001d004058_P001	Maize	cytosol	78.21	14.12
CDY45552	Canola	cytosol	62.82	13.54
ATMG00290.1	Thale cress	cytosol	61.54	13.26
AT2G07734.1	Thale cress	cytosol	61.54	13.26
Solyc01g017630.1.1	Tomato	cytosol	6.41	4.42
PGSC0003DMT400083810	Potato	cytosol	6.41	2.81
Solyc10g045740.1.1	Tomato	cytosol, mitochondrion	2.56	2.04
OQU81276	Sorghum	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G059510.1	EnsemblPlantsGene:HORVU4Hr1G059510	InterPro:Ribosomal_S4/S9	ncoils:Coil	PANTHER:PTHR11831	PANTHER:PTHR11831:SF12
SEG:seg	UniParc:UPI000B4843EF	UniProt:A0A287P9P2	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr4H:-:497460902..497462330

Molecular Weight (calculated)

9438.7 Da

IEP (calculated)

12.405

GRAVY (calculated)

-0.909

Length

78 amino acids

Sequence
(BLAST)

1: MPALRFKTCR LLPGNFRNIE LSLIQRRILR RLRSKRRSIK RNLSRRENLN SNIKSQTTRK LSLYYGDLPI REMHTGRE

Best Arabidopsis Sequence Match ( AT2G07734.1 )
(BLAST)

001: MWLLKKLIQR DIDLSPLRFQ TCRLLSGNVR NRELTIIQRR ILRRLRNRKR SIKKRKIYPK KYLTSYIQLQ TTRKLPLFHG DLPITEMHRG TKRTSYIPFP
101: LNPETRFDVI PLRLHFLETI PQARQPISHR RVCVNKGMVS ITHFKLSHGD IISFQENNAI IRGEEIRRSF YKEISVEKII GKLLHQPLRM WRRSKTEWFH
201: LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKDKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP
301: HKLTMKRRIK RIELPTHYSE VNHRTPKAVV SYGPNIGHIP HDIRLKDPNL PLRSRNGRGQ NI

Arabidopsis Description

Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [Source:TAIR;Acc:AT2G07734]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.