Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G07734.1 | Thale cress | cytosol | 100.0 | 100.0 |
| CDY45552 | Canola | cytosol | 99.17 | 99.17 |
| VIT_00s0396g00050.t01 | Wine grape | mitochondrion | 84.81 | 84.81 |
| PGSC0003DMT400083810 | Potato | cytosol | 37.02 | 75.28 |
| HORVU0Hr1G011520.1 | Barley | mitochondrion | 72.65 | 73.67 |
| TraesCSU01G147800.1 | Wheat | mitochondrion | 72.38 | 73.39 |
| TraesCSU01G177800.1 | Wheat | mitochondrion | 72.1 | 73.11 |
| BAC19883 | Rice | mitochondrion | 70.99 | 73.01 |
| TraesCS6B01G338300.1 | Wheat | mitochondrion | 71.27 | 72.27 |
| GRMZM5G849223_P01 | Maize | plastid | 70.99 | 71.79 |
| TraesCS3B01G516800.1 | Wheat | mitochondrion | 71.27 | 71.47 |
| TraesCS2B01G283500.1 | Wheat | mitochondrion | 70.99 | 71.19 |
| TraesCS5A01G503000.1 | Wheat | mitochondrion | 69.89 | 70.87 |
| Solyc01g017630.1.1 | Tomato | cytosol | 22.1 | 70.8 |
| BAV58141 | Barley | mitochondrion | 72.65 | 68.67 |
| TraesCS6D01G092500.1 | Wheat | cytosol | 68.23 | 68.42 |
| Solyc11g030940.1.1 | Tomato | cytosol, plastid | 29.28 | 61.63 |
| HORVU4Hr1G059510.1 | Barley | mitochondrion | 13.26 | 61.54 |
| Solyc10g045740.1.1 | Tomato | cytosol, mitochondrion | 16.57 | 61.22 |
| HORVU4Hr1G023940.1 | Barley | mitochondrion, peroxisome | 32.87 | 59.5 |
| Zm00001d004058_P001 | Maize | cytosol | 69.61 | 58.33 |
| TraesCS1B01G262700.1 | Wheat | nucleus | 25.41 | 50.27 |
| OQU81276 | Sorghum | cytosol | 16.85 | 45.86 |
Protein Annotations
| MapMan:17.7.1.2.3 | Gene3D:3.10.290.10 | UniProt:A0A2P2CLF7 | ArrayExpress:ATMG00290 | EnsemblPlantsGene:ATMG00290 | RefSeq:ATMG00290 |
| TAIR:ATMG00290 | RefSeq:ATMG00290-TAIR-G | EnsemblPlants:ATMG00290.1 | TAIR:ATMG00290.1 | ProteinID:DAB41504.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005840 | InterPro:IPR002942 | InterPro:IPR036986 | PFAM:PF01479 |
| PFscan:PS50889 | PANTHER:PTHR11831 | PANTHER:PTHR11831:SF12 | Symbol:RPS4 | InterPro:Ribosomal_S4/S9 | InterPro:S4_RNA-bd |
| InterPro:S4_RNA-bd_sf | SMART:SM00363 | SUPFAM:SSF55174 | UniParc:UPI00000A7D7C | SEG:seg | : |
Description
RPS4mitochondrial ribosomal protein S4 [Source:TAIR;Acc:ATMG00290]
Coordinates
chrMt:-:82028..83116
Molecular Weight (calculated)
43028.2 Da
IEP (calculated)
11.738
GRAVY (calculated)
-0.655
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MWLLKKLIQR DIDLSPLRFQ TCRLLSGNVR NRELTIIQRR ILRRLRNRKR SIKKRKIYPK KYLTSYIQLQ TTRKLPLFHG DLPITEMHRG TKRTSYIPFP
101: LNPETRFDVI PLRLHFLETI PQARQPISHR RVCVNKGMVS ITHFKLSHGD IISFQENNAI IRGEEIRRSF YKEISVEKII GKLLHQPLRM WRRSKTEWFH
201: LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKDKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP
301: HKLTMKRRIK RIELPTHYSE VNHRTPKAVV SYGPNIGHIP HDIRLKDPNL PLRSRNGRGQ NI
101: LNPETRFDVI PLRLHFLETI PQARQPISHR RVCVNKGMVS ITHFKLSHGD IISFQENNAI IRGEEIRRSF YKEISVEKII GKLLHQPLRM WRRSKTEWFH
201: LLKTKRGCRL LLKSRFLQQL RSSMQEEDLE RTKKFGSEKV CLGSSFAEHK RMKRNLLKSL FLSKRRKDKN LNLPTRTISP IVYNSSLSLY SNSTYCFASP
301: HKLTMKRRIK RIELPTHYSE VNHRTPKAVV SYGPNIGHIP HDIRLKDPNL PLRSRNGRGQ NI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.