Factsheet for Zm00001d038120_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032562_P001	Maize	cytosol	91.85	77.26
Zm00001d002008_P001	Maize	cytosol	15.02	47.95
Zm00001d051781_P001	Maize	cytosol, extracellular	45.06	41.83
CDY05744	Canola	cytosol	17.17	31.75
CDY60520	Canola	cytosol	13.73	24.24
Zm00001d002372_P002	Maize	nucleus	24.89	10.51
Zm00001d049360_P004	Maize	extracellular	24.89	9.73
Zm00001d024339_P001	Maize	extracellular	24.46	9.63
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	16.31	9.52
Zm00001d048424_P003	Maize	plastid	29.61	9.32
Zm00001d034005_P003	Maize	plasma membrane	26.18	9.24
Zm00001d007890_P002	Maize	mitochondrion	24.46	8.73
Zm00001d031981_P002	Maize	cytosol	24.03	8.6
Zm00001d018896_P002	Maize	mitochondrion	25.75	8.5
Zm00001d011602_P001	Maize	nucleus	21.89	8.37
Zm00001d027731_P012	Maize	plastid	28.76	8.34
Zm00001d047072_P001	Maize	mitochondrion	15.88	7.57
Zm00001d043860_P001	Maize	mitochondrion	21.46	7.41
Zm00001d049729_P008	Maize	cytosol	19.31	6.25
Zm00001d034996_P005	Maize	cytosol	17.6	5.96
Zm00001d048501_P002	Maize	cytosol	18.03	5.54
Zm00001d010826_P001	Maize	cytosol	4.72	2.66

Protein Annotations

EnsemblPlants:Zm00001d038120_P001	EnsemblPlants:Zm00001d038120_T001	EnsemblPlantsGene:Zm00001d038120	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:BMS1_TSR1_C	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF30	PFAM:PF04146	PFAM:PF04950	PFscan:PS50882	ProteinID:AQK85710.1	SEG:seg
UniParc:UPI000842D96A	UniProt:A0A1D6M3H7	MapMan:35.2	:	:	:

Description

evolutionarily conserved C-terminal region 2

Coordinates

chr6:-:148607191..148610200

Molecular Weight (calculated)

26359.2 Da

IEP (calculated)

7.598

GRAVY (calculated)

-0.013

Length

233 amino acids

Sequence
(BLAST)

001: MEDGIGPVNR FPCNANFVRF FMFPIPVGMV PLRRFYVAFV YAPISFPPLP LIVLKNRDGE QSTIAAVGSL KSMDPDRIIL KKIVLTMYPQ SLESEIDRVV
101: YVPRSQRRKM VQGNLLSGGQ NMVVVAASWR PLVLMWHIVN GVSDNILNHI ILENNENKPV TNSRDTQEIC LEQGLHILKI FEDYHVSKTS IRNDLASAMG
201: NTPNPYEQAM STCVNDQAMM LSHMVWHEST ISL

Best Arabidopsis Sequence Match ( AT3G13460.4 )
(BLAST)

001: MATVAPPADP TDLLQKLSLD SPAKASEIPE PNKKTAVYQY GGVDVHGQVP SYDRSLTPML PSDAADPSVC YVPNPYNPYQ YYNVYGSGQE WTDYPAYTNP
101: EGVDMNSGIY GENGTVVYPQ GYGYAAYPYS PATSPAPQLG GEGQLYGAQQ YQYPNYFPNS GPYASSVATP TQPDLSANKP AGVKTLPADS NNVASAAGIT
201: KGSNGSAPVK PTNQATLNTS SNLYGMGAPG GGLAAGYQDP RYAYEGYYAP VPWHDGSKYS DVQRPVSGSG VASSYSKSST VPSSRNQNYR SNSHYTSVHQ
301: PSSVTGYGTA QGYYNRMYQN KLYGQYGSTG RSALGYGSSG YDSRTNGRGW AATDNKYRSW GRGNSYYYGN ENNVDGLNEL NRGPRAKGTK NQKGNLDDSL
401: EVKEQTGESN VTEVGEADNT CVVPDREQYN KEDFPVDYAN AMFFIIKSYS EDDVHKSIKY NVWASTPNGN KKLAAAYQEA QQKAGGCPIF LFFSVNASGQ
501: FVGLAEMTGP VDFNTNVEYW QQDKWTGSFP LKWHIVKDVP NSLLKHITLE NNENKPVTNS RDTQEVKLEQ GLKIVKIFKE HSSKTCILDD FSFYEVRQKT
601: ILEKKAKQTQ KQVSEEKVTD EKKESATAES ASKESPAAVQ TSSDVKVAEN GSVAKPVTGD VVANGC

Arabidopsis Description

ECT2ECT2 [Source:UniProtKB/TrEMBL;Acc:A0A178VBC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.