Factsheet for Zm00001d047072_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	67.08	82.21
Zm00001d002008_P001	Maize	cytosol	11.25	75.34
Zm00001d024339_P001	Maize	extracellular	46.83	38.68
EES14722	Sorghum	nucleus	45.81	37.71
CDY51902	Canola	cytosol	11.66	36.77
Zm00001d049360_P004	Maize	extracellular	44.58	36.58
Os08t0224200-01	Rice	mitochondrion	42.33	33.44
TraesCS7A01G291700.1	Wheat	cytosol	39.88	33.05
TraesCS7B01G182100.2	Wheat	cytosol	39.67	32.77
HORVU7Hr1G069070.2	Barley	cytosol	39.47	32.71
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	39.47	31.54
GSMUA_Achr1P10560_001	Banana	nucleus	25.77	28.31
Zm00001d002372_P002	Maize	nucleus	30.06	26.63
Zm00001d031981_P002	Maize	cytosol	34.15	25.65
Bra034710.1-P	Field mustard	nucleus	31.08	25.59
CDY23562	Canola	nucleus	32.31	25.48
VIT_01s0010g03690.t01	Wine grape	cytosol	29.45	25.17
CDY44025	Canola	nucleus	31.9	25.08
Bra039366.1-P	Field mustard	nucleus	30.67	24.96
KRH46969	Soybean	endoplasmic reticulum, extracellular	32.92	24.88
KRH44697	Soybean	mitochondrion	33.33	24.77
AT3G13060.2	Thale cress	nucleus	32.11	24.76
CDY43378	Canola	nucleus	31.08	24.76
CDY24224	Canola	nucleus	31.08	24.76
Bra006780.1-P	Field mustard	cytosol	25.56	24.56
VIT_09s0054g01600.t01	Wine grape	nucleus	33.33	24.47
CDY58572	Canola	nucleus	25.36	24.46
AT5G58190.2	Thale cress	nucleus	26.38	24.43
Solyc05g032850.2.1	Tomato	nucleus	29.86	24.17
CDX88661	Canola	nucleus	25.15	24.12
CDY02802	Canola	nucleus	25.56	23.41
CDY32718	Canola	nucleus	25.15	23.25
Bra020382.1-P	Field mustard	nucleus	25.36	22.42
Zm00001d034005_P003	Maize	plasma membrane	30.06	22.27
CDY67303	Canola	nucleus	23.72	22.26
CDX90116	Canola	nucleus	23.72	22.26
AT1G27960.1	Thale cress	cytosol	24.54	22.26
Bra010911.1-P	Field mustard	nucleus	23.52	22.07
Zm00001d007890_P002	Maize	mitochondrion	28.63	21.44
CDY11758	Canola	nucleus, plastid	23.72	20.94
Zm00001d011602_P001	Maize	nucleus	24.95	20.03
Zm00001d018896_P002	Maize	mitochondrion	28.22	19.55
Zm00001d048424_P003	Maize	plastid	29.45	19.46
VIT_11s0065g00160.t01	Wine grape	nucleus	28.22	18.78
Zm00001d027731_P012	Maize	plastid	29.45	17.93
Zm00001d043860_P001	Maize	mitochondrion	23.72	17.19
Zm00001d048501_P002	Maize	cytosol	25.56	16.49
Zm00001d034996_P005	Maize	cytosol	22.49	15.99
Zm00001d032562_P001	Maize	cytosol	9.0	15.88
Zm00001d038120_P001	Maize	cytosol	7.57	15.88
Zm00001d010826_P001	Maize	cytosol	12.47	14.73
Zm00001d049729_P008	Maize	cytosol	21.68	14.72
Zm00001d051781_P001	Maize	cytosol, extracellular	7.36	14.34

Protein Annotations

KEGG:00400+4.2.1.51	MapMan:16.5.2.1	Gene3D:3.10.590.10	Gene3D:3.40.190.10	MapMan:4.1.5.2.4	UniProt:A0A1D6P6Q8
ProteinID:AQL05539.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004601
GO:GO:0004664	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009094	GO:GO:0009987	GO:GO:0020037	GO:GO:0055114	GO:GO:0098869
InterPro:Haem_peroxidase	InterPro:IPR001086	InterPro:IPR007275	PFAM:PF00800	PFAM:PF04146	PFscan:PS50882
PFscan:PS51171	PANTHER:PTHR12357	PANTHER:PTHR12357:SF64	InterPro:Preph_deHydtase	SUPFAM:SSF48113	SUPFAM:SSF53850
UniParc:UPI000844BFE7	InterPro:YTH_domain	EnsemblPlantsGene:Zm00001d047072	EnsemblPlants:Zm00001d047072_P001	EnsemblPlants:Zm00001d047072_T001	:

Description

evolutionarily conserved C-terminal region 10

Coordinates

chr9:+:117272916..117276493

Molecular Weight (calculated)

54205.5 Da

IEP (calculated)

7.022

GRAVY (calculated)

-0.546

Length

489 amino acids

Sequence
(BLAST)

001: MDAVAVLDAF SAAPWHQLRP TAWCRSTRFA SQACHATAPF ARDDWQAACA IHASNSTGGD GHDASSNTQP APRVNGQKPS PALEATPTLM PDELDLVLVS
101: NLPRPLSIND LSPAPMHTPQ LRVAYQGVPG ANSEATAAKA YPGCDAIPCD QFEVAFQAVE LWITDRAVLP MENPLGGRIH RNYDLLLRHR LHIVGEHHGS
201: MYGPGSYKGC QQGSKFGGST TSWSSVGRRF GTIDLSGNQQ RGNMPFCSHN GSLEFMNEQN HGPHATKPKV QGIENTSRDE RSEKIVPLID SELYNRSDFI
301: TEYKDAKFFV IKSYTEDHAH RSIKYKVWAS TASGNRKLDS SYHAAKEKEE HCPIFLFFSV NGSGQFCGMA DMIGSVDFDR SVDYWQQNKW SGQFPVKWHI
401: IKDVPNNLLW HIILENNDNK PVTNSRDTHE VRLGWHDAGT YDKNIIEWPK CSGANGSLRF KVELKHGANA DLVNALKLIP PSTTPEPHP

Best Arabidopsis Sequence Match ( AT3G13060.1 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.