Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44025 | Canola | nucleus | 99.03 | 98.71 |
| Bra034710.1-P | Field mustard | nucleus | 93.87 | 97.98 |
| AT3G13060.2 | Thale cress | nucleus | 89.68 | 87.7 |
| CDY43378 | Canola | nucleus | 85.81 | 86.64 |
| CDY24224 | Canola | nucleus | 85.0 | 85.83 |
| CDY51902 | Canola | cytosol | 21.45 | 85.81 |
| Zm00001d002008_P001 | Maize | cytosol | 9.68 | 82.19 |
| CDY57677 | Canola | mitochondrion | 13.71 | 49.71 |
| Os08t0556000-01 | Rice | nucleus | 49.03 | 48.72 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 45.32 | 48.36 |
| KXG25412 | Sorghum | cytosol | 48.87 | 47.42 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 48.06 | 46.42 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 47.9 | 46.26 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 48.39 | 46.23 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 47.74 | 46.11 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 47.74 | 46.11 |
| Zm00001d031981_P002 | Maize | cytosol | 48.06 | 45.78 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 43.55 | 45.08 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 45.32 | 44.96 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 45.16 | 44.8 |
| EES14722 | Sorghum | nucleus | 42.42 | 44.28 |
| Zm00001d049360_P004 | Maize | extracellular | 40.81 | 42.45 |
| Os08t0224200-01 | Rice | mitochondrion | 42.26 | 42.33 |
| Zm00001d024339_P001 | Maize | extracellular | 40.32 | 42.23 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 40.16 | 42.06 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 39.84 | 41.86 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 29.84 | 41.57 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 39.52 | 41.53 |
| CDX91541 | Canola | mitochondrion | 10.81 | 41.1 |
| CDY29972 | Canola | nucleus | 27.1 | 40.98 |
| CDY50448 | Canola | cytosol | 16.61 | 40.39 |
| CDY21154 | Canola | nucleus | 26.45 | 40.29 |
| Os04t0608800-01 | Rice | nucleus | 36.77 | 40.14 |
| CDY07437 | Canola | nucleus | 26.94 | 39.67 |
| CDY69959 | Canola | nucleus | 25.48 | 39.6 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 39.03 | 39.54 |
| CDY50867 | Canola | nucleus | 25.32 | 39.25 |
| CDY42891 | Canola | nucleus | 25.32 | 39.25 |
| CDY39299 | Canola | nucleus | 26.77 | 39.24 |
| CDY02802 | Canola | nucleus | 33.71 | 39.14 |
| CDY32718 | Canola | nucleus | 33.39 | 39.13 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 48.39 | 38.91 |
| CDY58572 | Canola | nucleus | 31.45 | 38.46 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 24.68 | 38.35 |
| CDX88661 | Canola | nucleus | 31.45 | 38.24 |
| CDY56132 | Canola | nucleus | 27.1 | 37.58 |
| CDY52966 | Canola | cytosol | 26.94 | 37.28 |
| CDX87395 | Canola | cytosol | 26.61 | 37.16 |
| KXG27074 | Sorghum | cytosol | 32.9 | 36.96 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 28.23 | 36.92 |
| CDX88524 | Canola | cytosol | 26.29 | 36.88 |
| CDY67303 | Canola | nucleus | 30.65 | 36.47 |
| CDX90116 | Canola | nucleus | 30.65 | 36.47 |
| CDY43989 | Canola | nucleus | 36.61 | 35.8 |
| CDY23602 | Canola | nucleus | 35.97 | 35.74 |
| CDY22270 | Canola | cytosol | 25.81 | 35.71 |
| CDY56809 | Canola | cytosol | 25.81 | 35.71 |
| Zm00001d002372_P002 | Maize | nucleus | 31.29 | 35.14 |
| CDY11758 | Canola | nucleus, plastid | 30.97 | 34.66 |
| CDY07089 | Canola | nucleus | 35.16 | 34.28 |
| CDY24182 | Canola | nucleus | 29.84 | 34.2 |
| CDX75712 | Canola | nucleus | 34.84 | 34.07 |
| CDX82538 | Canola | nucleus | 34.84 | 33.75 |
| CDX68000 | Canola | nucleus | 26.77 | 32.61 |
| CDY05744 | Canola | cytosol | 6.61 | 32.54 |
| CDX79309 | Canola | nucleus | 26.61 | 32.42 |
| Zm00001d047072_P001 | Maize | mitochondrion | 25.48 | 32.31 |
| CDX94944 | Canola | nucleus | 24.68 | 30.78 |
| CDX93476 | Canola | nucleus | 24.52 | 30.4 |
| CDX93645 | Canola | nucleus | 28.55 | 28.92 |
| CDY43306 | Canola | cytosol | 28.55 | 28.87 |
| CDY60520 | Canola | cytosol | 4.52 | 21.21 |
Protein Annotations
| EnsemblPlants:CDY23562 | EnsemblPlantsGene:GSBRNA2T00023752001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF24 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY23562 | ProteinID:CDY23562.1 | SEG:seg | UniParc:UPI0004EC0E76 | UniProt:A0A078GEP7 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
BnaC05g40320DBnaC05g40320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEP7]
Coordinates
chrLK032145:+:65699..69100
Molecular Weight (calculated)
68086.2 Da
IEP (calculated)
5.087
GRAVY (calculated)
-0.780
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTPSHATD LIPSEEQPAN LDIMKEQPVP ANNESSQESA VVVHPAKVAP LSGPYGITGD LAGHLPSSIL SPQAQGFYYT GYENPTGEWD DYSSYVNVEG
101: LDITSPVGFN ENASLVYQTG YGYNPQMPYG PYSPAASPLP SEGQLYSPYY QQVVPPSMQY ISSPTQPELT SLVGVDQQGD NMGGPRPSYH PHPIGPFNGN
201: QPNLGFPEWQ QGFDGGIWSD WSKPSDMHRH SSHVSPALSP QPLGSFGSYG HNIPMGSQRQ RSFYGYGSGS NSYNRGYMHS GGHGQGSNYG SRLISNVGMG
301: NQGWIGVDNI RGRGRVNDPS SLGGGYNGNF DILNEQNRGP RASKPKTQVS SEELDSSADT KKHNKGSTKE HEDSNNNSND FVTDYNDAKL FIIKSYSEDN
401: VHKSIKYNVW ASTANGNKKL DAAYREAKEE KEPCPVFLLF SVNASSQFCG VAEMIGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ FRHIILENND
501: NKPVTNSRDT QEVKLEQGIE MLKIFKSYDA ETSILDDFEF YEEREKIIQD RKARRQPSLP SGVVESGDKP SSAALQTDLI KNMSKSFAQV VRLDEGSKES
601: GKTSSSPDAT TTTVAVSQSN
101: LDITSPVGFN ENASLVYQTG YGYNPQMPYG PYSPAASPLP SEGQLYSPYY QQVVPPSMQY ISSPTQPELT SLVGVDQQGD NMGGPRPSYH PHPIGPFNGN
201: QPNLGFPEWQ QGFDGGIWSD WSKPSDMHRH SSHVSPALSP QPLGSFGSYG HNIPMGSQRQ RSFYGYGSGS NSYNRGYMHS GGHGQGSNYG SRLISNVGMG
301: NQGWIGVDNI RGRGRVNDPS SLGGGYNGNF DILNEQNRGP RASKPKTQVS SEELDSSADT KKHNKGSTKE HEDSNNNSND FVTDYNDAKL FIIKSYSEDN
401: VHKSIKYNVW ASTANGNKKL DAAYREAKEE KEPCPVFLLF SVNASSQFCG VAEMIGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ FRHIILENND
501: NKPVTNSRDT QEVKLEQGIE MLKIFKSYDA ETSILDDFEF YEEREKIIQD RKARRQPSLP SGVVESGDKP SSAALQTDLI KNMSKSFAQV VRLDEGSKES
601: GKTSSSPDAT TTTVAVSQSN
001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
Arabidopsis Description
ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.