Factsheet for TraesCS7D01G285000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G291700.1	Wheat	cytosol	90.36	93.73
TraesCS7B01G182100.2	Wheat	cytosol	90.52	93.58
HORVU7Hr1G069070.2	Barley	cytosol	86.76	90.0
Zm00001d002008_P001	Maize	cytosol	10.46	87.67
EES14722	Sorghum	nucleus	68.14	70.2
Zm00001d049360_P004	Maize	extracellular	66.99	68.79
Zm00001d024339_P001	Maize	extracellular	66.5	68.75
Os08t0224200-01	Rice	mitochondrion	69.28	68.5
CDY51902	Canola	cytosol	13.73	54.19
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	31.86	48.87
TraesCS1D01G045100.1	Wheat	nucleus	43.3	41.28
Bra034710.1-P	Field mustard	nucleus	38.73	39.9
Bra039366.1-P	Field mustard	nucleus	39.05	39.77
VIT_09s0054g01600.t01	Wine grape	nucleus	43.14	39.64
Zm00001d047072_P001	Maize	mitochondrion	31.54	39.47
KRH46969	Soybean	endoplasmic reticulum, extracellular	41.67	39.41
CDY43378	Canola	nucleus	39.38	39.25
AT3G13060.2	Thale cress	nucleus	40.52	39.12
CDY23562	Canola	nucleus	39.54	39.03
CDY24224	Canola	nucleus	39.05	38.93
CDY44025	Canola	nucleus	39.54	38.91
TraesCS7D01G276800.4	Wheat	nucleus	39.54	38.72
KRH44697	Soybean	mitochondrion	41.5	38.6
GSMUA_Achr1P10560_001	Banana	nucleus	26.63	36.63
VIT_01s0010g03690.t01	Wine grape	cytosol	33.17	35.49
Bra006780.1-P	Field mustard	cytosol	27.94	33.6
CDX88661	Canola	nucleus	27.94	33.53
Solyc05g032850.2.1	Tomato	nucleus	33.01	33.44
CDY58572	Canola	nucleus	27.61	33.33
CDY32718	Canola	nucleus	28.27	32.7
AT5G58190.2	Thale cress	nucleus	28.1	32.58
CDY02802	Canola	nucleus	27.94	32.02
Bra020382.1-P	Field mustard	nucleus	28.43	31.46
VIT_11s0065g00160.t01	Wine grape	nucleus	34.31	28.57
TraesCS5D01G439100.1	Wheat	nucleus	27.45	28.57
CDY67303	Canola	nucleus	24.02	28.21
CDX90116	Canola	nucleus	24.02	28.21
Bra010911.1-P	Field mustard	nucleus	23.86	28.02
TraesCS5D01G396400.3	Wheat	nucleus	30.23	27.95
TraesCS5D01G439200.1	Wheat	cytosol	28.76	27.41
CDY11758	Canola	nucleus, plastid	24.67	27.26
AT1G27960.1	Thale cress	cytosol	23.53	26.72
TraesCS4D01G273200.4	Wheat	cytosol	29.58	25.03
TraesCS3D01G267900.1	Wheat	nucleus	27.61	24.56
TraesCS4D01G180500.5	Wheat	cytosol, nucleus, plastid	27.45	23.56
TraesCS2D01G012200.1	Wheat	cytosol	24.18	20.85
TraesCS3D01G199400.2	Wheat	cytosol	21.73	19.33
TraesCS1D01G109300.1	Wheat	cytosol	20.91	18.13

Protein Annotations

EnsemblPlants:TraesCS7D01G285000.1	EnsemblPlantsGene:TraesCS7D01G285000	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF64	PFAM:PF04146
PFscan:PS50882	SignalP:SignalP-noTM	MapMan:16.5.2.1	:	:	:

Description

No Description!

Coordinates

chr7D:-:306457965..306461003

Molecular Weight (calculated)

69022.0 Da

IEP (calculated)

5.637

GRAVY (calculated)

-0.729

Length

612 amino acids

Sequence
(BLAST)

001: MCACTFLFVD CTILLQSEIV VDNNPSKSVN TKEQIISITA EKTSATDARG STSLESPKGS QEKANFLGKG GEQPYVYQTN VYAPQPQTVY SGGYINPSGQ
101: WEEYPYYVSM EGLHSASPSI MLSPGYANNP QMMYGAYSPV ATVGEGQSYS PMHFPFSSPY YQPPASLSMG YSNSSTGMSQ GDPMLQQEYF LPDGLLYSPT
201: TVYHQPFESY NRDWSEPFQT NCEFLPQRQH NQAMLRDYLG KGMHHWFLEC IDYACYLQQH GSMYNSGSYK ARQQASKYGG ITPNWGSAGR RFNNFDYNSS
301: QQRVSMPFNI QNGALEFLNE QNRGPRAAKP KKQDRDNSLV DDKSEKTTQL IDSELYNCPD FATEYKDAIF FVIKSYTEDH VHRSIKYNVW ASTASGNRKL
401: DSAYRAAKQK EDHCRVFLFF SVNGSGQFCG VAEMIGPVDF DRSVDYWQQD KWSGQFPVKW HIIKDVPNTL LRHITLENND NKPVTNSRDT QEVKLEYGLQ
501: MLSIFKNHEA ETSIVEDFDF YEQREKALKE NRRQQQPGSA ESLKPTDAKA VGNSVTHIAD SFSRSVQLKE IEKSDNKLTA DGAISVNDAQ TATVKAEESN
601: ANKTKGPVEE SS

Best Arabidopsis Sequence Match ( AT3G13060.1 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.