CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46969	Soybean	endoplasmic reticulum, extracellular	92.4	93.97
Zm00001d002008_P001	Maize	cytosol	8.66	78.08
VIT_09s0054g01600.t01	Wine grape	nucleus	66.41	65.62
GSMUA_Achr4P12480_001	Banana	cytosol	45.29	51.29
KRH26322	Soybean	cytosol	9.88	50.78
GSMUA_Achr4P11560_001	Banana	nucleus	48.63	49.31
Os08t0556000-01	Rice	nucleus	46.05	48.56
KXG25412	Sorghum	cytosol	46.05	47.42
HORVU1Hr1G008330.2	Barley	nucleus	45.59	46.73
TraesCS1D01G045100.1	Wheat	nucleus	45.29	46.42
TraesCS1A01G044500.1	Wheat	nucleus	45.29	46.42
TraesCS1B01G057800.3	Wheat	nucleus	44.83	45.95
EES14722	Sorghum	nucleus	41.34	45.79
TraesCS7A01G276800.3	Wheat	nucleus	42.4	44.64
Zm00001d049360_P004	Maize	extracellular	40.43	44.63
Zm00001d024339_P001	Maize	extracellular	40.12	44.59
GSMUA_Achr4P04600_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	52.13	44.49
Os08t0224200-01	Rice	mitochondrion	41.79	44.43
Zm00001d031981_P002	Maize	cytosol	43.92	44.39
TraesCS7D01G276800.4	Wheat	nucleus	41.95	44.16
HORVU7Hr1G069070.2	Barley	cytosol	39.51	44.07
TraesCS7B01G182100.2	Wheat	cytosol	39.36	43.75
TraesCS7B01G174500.1	Wheat	nucleus	39.82	43.74
TraesCS7A01G291700.1	Wheat	cytosol	38.75	43.22
Os04t0608800-01	Rice	nucleus	36.78	42.61
KRH36908	Soybean	cytosol	28.27	41.89
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	38.6	41.5
GSMUA_Achr1P10560_001	Banana	nucleus	27.2	40.22
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	24.32	40.1
HORVU7Hr1G058250.46	Barley	cytosol, plastid	28.27	39.24
KXG27074	Sorghum	cytosol	32.67	38.95
Zm00001d002372_P002	Maize	nucleus	31.46	37.5
KRH59123	Soybean	nucleus	36.02	33.47
Zm00001d047072_P001	Maize	mitochondrion	24.77	33.33
KRH43645	Soybean	nucleus	29.33	33.33
KRH13810	Soybean	nucleus, plastid	29.18	33.28
KRH43005	Soybean	nucleus	35.56	33.1
KRG94807	Soybean	nucleus	30.55	30.5
KRH02430	Soybean	cytosol	31.61	29.97
KRH50636	Soybean	cytosol	31.46	29.78
KRH06717	Soybean	nucleus	29.79	29.56
KRH06073	Soybean	cytosol, nucleus, peroxisome	21.28	28.23
KRH11876	Soybean	endoplasmic reticulum	29.64	27.82
KRH70155	Soybean	nucleus	25.99	27.14

Protein Annotations

EMBL:ACUP02004950	EnsemblPlants:KRH44697	EnsemblPlantsGene:GLYMA_08G226100	EntrezGene:100779278	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF24	PFAM:PF04146	PFscan:PS50882	ProteinID:KRH44697	ProteinID:KRH44697.1	UniParc:UPI00023C6312
UniProt:A0A0R0IVW0	MapMan:16.5.2.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:18338930..18346020

Molecular Weight (calculated)

72060.2 Da

IEP (calculated)

5.608

GRAVY (calculated)

-0.625

Length

658 amino acids

Sequence
(BLAST)

001: MLCGFPLQIH GGNPTTAGSG SYHRSYCQLS LLIMHAEEIP AEPDNLKEQG TTTIGHSRET TSQSGSLGSV GDCPLYPPNV YAPQAQAFYY RGFDNGNGEW
101: DEYSSYVNSE GLDIGSPGVY NENPSLIFHS GYGFNPQVPY GPYSPVTTPL PSVGVDTQLY SPQQFPYTGP PYYHQLVPPS LPYLNSPTPV SQPELTNLVG
201: IDQQVDNMFF GPRAGYPSVG SFGRGNFPVA PGSFGFHESQ QGFEGSRSGG IWSDCSKPSE RQRSLMPLSP SVSPQPMGSL GSFGPSVGMA SHQQQSLYGF
301: GSGSNSYGRG YLPNQGSSFG GTSISNLNDR SFASLENSRR QGRPTASLCN CNGTLDILSE QNRGPRASKL KNQISTENNS VDSSKNSAST AKFQNESLNR
401: SDFATDYKDA KFFVIKSYSE DNVHKSIKYG VWASTPNGNR KLDDAYRQAM EKQDACPIFL FFSVNASAQF CGVAEMVGPV NFDKSVDFWQ QDKWSGQFPL
501: KWHIIKDVPN SQFRHIILEN NDNKPVTNSR DTQEVKLGQG VEMLTIFKNY ETDVSILDDF DFYEDRQKAM QERKARQQSS MVATGLVGEN EHRSSANTTG
601: DFMKQMSKSF ALVVRLDENN KEVVADRDSL VSHGHGPIGN VVKPDDGQSV TASSTQTS

Best Arabidopsis Sequence Match ( AT3G13060.2 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.