CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26322	Soybean	cytosol	23.79	92.19
GSMUA_Achr6P12810_001	Banana	nucleus	30.65	43.18
PGSC0003DMT400064041	Potato	cytosol	37.9	32.98
Solyc01g103540.2.1	Tomato	nucleus	36.9	32.97
VIT_12s0035g00970.t01	Wine grape	plastid	44.96	31.5
AT1G09810.1	Thale cress	nucleus	28.83	30.43
KRH36908	Soybean	cytosol	26.61	29.73
CDX94944	Canola	nucleus	29.23	29.18
Bra019988.1-P	Field mustard	nucleus	29.23	28.94
CDX93476	Canola	nucleus	28.83	28.6
KRH13810	Soybean	nucleus, plastid	28.43	24.44
KRH43645	Soybean	nucleus	28.02	24.01
KXG21015	Sorghum	nucleus	28.83	21.9
KRH46969	Soybean	endoplasmic reticulum, extracellular	28.23	21.64
Os05t0105600-01	Rice	cytosol	27.62	21.47
KRH44697	Soybean	mitochondrion	28.23	21.28
KRH02430	Soybean	cytosol	29.64	21.18
KRH50636	Soybean	cytosol	29.23	20.86
Os04t0129300-01	Rice	nucleus	28.02	20.59
KRH11876	Soybean	endoplasmic reticulum	28.02	19.83
KRH43005	Soybean	nucleus	28.02	19.66
KRH59123	Soybean	nucleus	27.82	19.49
KRH70155	Soybean	nucleus	24.6	19.37
HORVU2Hr1G023660.2	Barley	nucleus	27.62	19.32
TraesCS2A01G011400.1	Wheat	nucleus	27.62	19.27
TraesCS2B01G010200.1	Wheat	cytosol	27.62	19.19
TraesCS2D01G012200.1	Wheat	cytosol	27.42	19.15
KRG94807	Soybean	nucleus	24.8	18.66
Zm00001d048501_P002	Maize	cytosol	28.43	18.6
KRH06717	Soybean	nucleus	23.99	17.95
HORVU2Hr1G001810.8	Barley	cytosol	28.02	17.64

Protein Annotations

EMBL:ACUP02009815	EnsemblPlants:KRH06073	EnsemblPlantsGene:GLYMA_16G003200	EntrezGene:100800887	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF56	PFAM:PF04146	PFscan:PS50882	ProteinID:KRH06073	ProteinID:KRH06073.1	UniParc:UPI0003DEBF72
UniProt:A0A0R0FSP6	MapMan:16.5.2.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:172942..178668

Molecular Weight (calculated)

56043.3 Da

IEP (calculated)

10.010

GRAVY (calculated)

-0.655

Length

496 amino acids

Sequence
(BLAST)

001: MNRHDQFQKP QSLSKGTTDH SQHQNKEDVV SIKDCISPDL TSFATSSGDV AAGFTGVHES EALSCYSSVS TSVGVQSKTV KGSVIAKNNP KSSGLMKPNK
101: LKSTHRNGIL TSTISETVAD TGKDIKILNK APHLRSNFPA ATAPNTYHQI GKFSSLANPT CHVSPPTNHR PNTSTNYRPT GRVSNVNDRV LLGDNKFRSG
201: QSEMSMEMTR GPRGHYNNFL LQPSLVKDAL AITICRDEYN LSDFQTEYEI AKFYVIKSFN EDDVHKSVKY NVWTSTPNGN KKLNAAFLDA EAKLRQTGTK
301: CPVFLFFSVN ASRQFVGVAE MLGPVDFKND MNFWKLDKYN GFFPIKWHII KDVPNNQFVH IILPSNENKP VTYTRDTQEI GLKEGLEMLN IFRSYTAKTS
401: LLDDFDFYER REKLFRSQRS TKHKHARPEQ EVYGNDNYQV RTLSKPERRK WRCNRVVPSK VLSSNIPKTF LSTTLDLDSK IGRGEKESPI FISTRM

Best Arabidopsis Sequence Match ( AT1G09810.1 )
(BLAST)

001: MATEKNTLDS EATFAQTVPA LDSTTKKQDE SPPKSTPSLT VTACANGSDV VSSQPNDNGQ AHTTDFRKGN HRDKNSSDVY ADSTLRGDRP KGSNCLSQTS
101: FSAPKPLGNF NGAGRLPPNT QAHAFRPPFK GKEAAGQFLT FSNQKTSCVP YSGYINGNSN NGFWDQRDHN KKPERNGESD YLVELKCGPR ANAKTRPPSE
201: SSPLKQNNSF ALALRREMYN LPDFQTDYED AKFFVIKSYS EDDVHKSIKY SVWSSTINGN KKLDAAFRDA ETKTLEDGKK RPIFLFFSVN ASRQFVGLAE
301: MVGYVDFNKD LDFWQVDKWS GFFPVEWHVV KDIPNWELRH IILDNNEDKP VTHTRDTHEI KLKEGLQMLS IFKKYSAVTF LLDDMDFYEE REKSLRAKKE
401: HKPATLRMDL FKEKDYDYEM EGNRRMNHQE RGYNWNRSSN SKTQASLVNQ TKYLSIRGYS GYKKNTGNST

Arabidopsis Description

ECT11Evolutionarily conserved C-terminal region 11 [Source:UniProtKB/TrEMBL;Acc:Q56XH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.