Factsheet for Zm00001d048501_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21015	Sorghum	nucleus	68.73	79.79
Zm00001d002008_P001	Maize	cytosol	6.07	63.01
Os05t0105600-01	Rice	cytosol	47.63	56.58
KRH26322	Soybean	cytosol	8.84	52.34
HORVU2Hr1G023660.2	Barley	nucleus	45.38	48.52
TraesCS2A01G011400.1	Wheat	nucleus	44.59	47.54
TraesCS2D01G012200.1	Wheat	cytosol	44.46	47.46
Os04t0129300-01	Rice	nucleus	42.08	47.26
TraesCS2B01G010200.1	Wheat	cytosol	44.46	47.2
HORVU2Hr1G001810.8	Barley	cytosol	44.59	42.89
GSMUA_Achr6P12810_001	Banana	nucleus	18.47	39.77
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	15.83	30.08
KRH06073	Soybean	cytosol, nucleus, peroxisome	18.6	28.43
Solyc01g103540.2.1	Tomato	nucleus	20.71	28.29
PGSC0003DMT400064041	Potato	cytosol	20.84	27.72
AT1G09810.1	Thale cress	nucleus	17.15	27.66
CDX94944	Canola	nucleus	17.55	26.76
Bra019988.1-P	Field mustard	nucleus	17.41	26.35
Zm00001d002372_P002	Maize	nucleus	19.0	26.09
CDX93476	Canola	nucleus	17.15	26.0
Zm00001d034005_P003	Maize	plasma membrane	22.56	25.91
Zm00001d047072_P001	Maize	mitochondrion	16.49	25.56
Zm00001d049360_P004	Maize	extracellular	19.53	24.83
Zm00001d024339_P001	Maize	extracellular	19.39	24.83
Zm00001d031981_P002	Maize	cytosol	21.11	24.58
VIT_12s0035g00970.t01	Wine grape	plastid	22.96	24.58
Zm00001d011602_P001	Maize	nucleus	19.53	24.3
Zm00001d007890_P002	Maize	mitochondrion	20.45	23.74
Zm00001d048424_P003	Maize	plastid	21.9	22.43
Zm00001d043860_P001	Maize	mitochondrion	19.92	22.37
Zm00001d018896_P002	Maize	mitochondrion	20.71	22.24
Zm00001d027731_P012	Maize	plastid	22.82	21.54
Zm00001d010826_P001	Maize	cytosol	11.61	21.26
Zm00001d051781_P001	Maize	cytosol, extracellular	6.2	18.73
Zm00001d038120_P001	Maize	cytosol	5.54	18.03
Zm00001d034996_P005	Maize	cytosol	15.44	17.01
Zm00001d032562_P001	Maize	cytosol	6.2	16.97
Zm00001d049729_P008	Maize	cytosol	16.09	16.94

Protein Annotations

EnsemblPlants:Zm00001d048501_P002	EnsemblPlants:Zm00001d048501_T002	EnsemblPlantsGene:Zm00001d048501	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	ncoils:Coil	PANTHER:PTHR12357
PANTHER:PTHR12357:SF35	PFAM:PF04146	PFscan:PS50882	ProteinID:AQL09951.1	SEG:seg	UniParc:UPI0008438989
UniProt:A0A1D6PL32	MapMan:16.5.2.1	:	:	:	:

Description

evolutionarily conserved C-terminal region 11

Coordinates

chr9:+:157420891..157429290

Molecular Weight (calculated)

86172.2 Da

IEP (calculated)

9.268

GRAVY (calculated)

-0.754

Length

758 amino acids

Sequence
(BLAST)

001: MSYLSLRGPY IPLDIEQGSN HKAERHPRAA GARSAHRRAA VRLPPHRPAP VLQARLARLS YALPLATRGL LGGSTSFPPL PSSHRPRSLD RGRRPPATYC
101: PGPGRALGAS SQTHPCRCRP IWFLALEMQE VSDPPETVRK AETKNITSIG KDVIFEQDPC SSYQLWGSMK FEEDGHLLSQ AKRDLSHLDY RAQSADTKYV
201: TELGSHACLK DPLPMGRDYH RQKLQFSTSD CSFEKASALE AASSSPDALG TMRTKIKSST LSASPDYLSS YPTAAPCMRK CPGAVELDHG LGHSEHSNRR
301: SDQFTLFSSR NGRSVEKCKE LTFFCVSIFH RDKFLLKQMV QYARGFHHAD EINHVPFQWC FEDEGPSVSR GLQYGDEIPS LSRKKYNVAP SRSSQWHYGP
401: QTALSSRRPD YGDEIPSLSL HYGYRDRTHL RSGNWCHDAE ARIPSRYQQG TSHGNGHSRN CFSRINTNEQ AKVITSKHTF AKPRMINRNC SDQHRINMKG
501: NRWRNSEDLM DQVRGPRANK LNNASVSSTV KDITSPLIRR NQYNRSDFSV QYNQAKFFMI KSYSEDDIHK GIKYNVWAST PNGNNKLDAA YHEAQNLMDS
601: GERCPVFLFF SVNTSGQFVG LAEMLGPVDF KKTMDFWEED KWSGFFPIKW HIIKDIPNRL FKHIILENND NRIVTFSRDT QEIGLPQGVQ MLKIFKEQPQ
701: GTSILDDFDF YEEKANARRT QKRGNSESTY GARFSDDSKS IENLEANMES WSLFETLE

Best Arabidopsis Sequence Match ( AT1G55500.1 )
(BLAST)

001: MDSNGQVPSF DRSLSPMLPS DALDPSVFYV PNVYQQPYYY GYGSDYTGYT NSESVDMTSG YGYAAFPYSP ATSPAPQLGG DGQLYGAQQY QYPFPLTASS
101: GPFASSVPAS TQSKLSTNKA ANSASAGIPK GMNGSAPVKP LNQSALYGNS ALGGGLAAGY QDPRYSYDGF YTPVSWHDGS NFSDVQRSVS GSGVASSYSK
201: ANNNVPATRN QNSSSNSHYT SMYQPASMTG YAAQGYYDRV SPNKSYGQYG STVRSGMGYG SSGYGSRTNE RGWLNTDNKY RSRGRGNSYF YGNENIDGLN
301: ELNRGPRAKG TKATEEVSSE EVKKQTFDES NTEETVTCVL PDREECNRDD FPVEYKDAKF FIIKSYSEDD VHKSIKYNVW ASTPNGNKKL DAAYQEAQQK
401: SSGCPVFLFF SVNASGQFIG LAEMKGPVDF NKNIEYWQQD KWTGSFPLKW HILKDVPNSL LKHITLEYNE NKPVTNSRDT QEVKLEQGLK VVKIFKEHNS
501: KTCILDDFSF YEARQKTILE KKAKQQQSQK QVWEGKTNDE KPGTVDSTM

Arabidopsis Description

ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.