Factsheet for Zm00001d018896_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006944_P001
Zm00001d022272_P002
Zm00001d024762_P001
Zm00001d040567_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13460.1	Zm00001d006944_P001	AT3G17510.1	16113215
AT3G13460.1	Zm00001d022272_P002	AT3G17510.1	16113215
AT3G13460.1	Zm00001d024762_P001	AT3G17510.1	16113215
AT3G13460.1	Zm00001d040567_P001	AT3G17510.1	16113215

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34475	Sorghum	cytosol	80.74	88.24
Zm00001d007890_P002	Maize	mitochondrion	80.31	86.83
Zm00001d002008_P001	Maize	cytosol	7.65	73.97
Os07t0170300-01	Rice	plasma membrane	57.79	67.77
TraesCS5D01G439100.1	Wheat	nucleus	45.75	54.93
TraesCS5A01G431200.1	Wheat	nucleus	45.75	54.84
TraesCS5B01G433000.1	Wheat	cytosol	46.03	54.53
CDY57677	Canola	mitochondrion	12.32	50.88
TraesCS5D01G439200.1	Wheat	cytosol	45.47	50.0
TraesCS5A01G431100.1	Wheat	cytosol	45.33	49.84
TraesCS5B01G432900.2	Wheat	extracellular	45.61	49.69
HORVU5Hr1G104380.1	Barley	plastid	46.32	49.47
HORVU5Hr1G104390.3	Barley	plastid	45.04	46.22
Bra004105.1-P	Field mustard	nucleus	24.93	44.44
CDY07437	Canola	nucleus	25.64	42.99
Bra008509.1-P	Field mustard	cytosol	25.64	42.79
CDY39299	Canola	nucleus	25.5	42.55
CDY50448	Canola	cytosol	15.3	42.35
CDY56132	Canola	nucleus	26.06	41.16
Bra031960.1-P	Field mustard	nucleus	23.09	41.16
CDX91541	Canola	mitochondrion	9.49	41.1
CDY69959	Canola	nucleus	23.09	40.85
CDY52966	Canola	cytosol	25.92	40.85
CDY50867	Canola	nucleus	23.09	40.75
CDY42891	Canola	nucleus	23.09	40.75
AT3G03950.3	Thale cress	cytosol	24.65	40.65
CDY21154	Canola	nucleus	23.37	40.54
CDY29972	Canola	nucleus	23.37	40.24
Bra036423.1-P	Field mustard	nucleus	23.09	40.15
CDY23602	Canola	nucleus	35.27	39.9
AT1G55500.5	Thale cress	cytosol	34.14	39.83
CDY43989	Canola	nucleus	35.69	39.75
VIT_08s0007g07450.t01	Wine grape	cytosol	38.95	39.63
Bra027432.1-P	Field mustard	nucleus	35.55	39.59
VIT_06s0004g00200.t01	Wine grape	nucleus	39.09	39.15
Bra001506.1-P	Field mustard	nucleus	35.41	39.12
CDX82538	Canola	nucleus	35.27	38.91
CDX75712	Canola	nucleus	34.7	38.64
CDY24182	Canola	nucleus	29.46	38.45
AT3G13460.1	Thale cress	cytosol	36.12	38.23
CDY07089	Canola	nucleus	34.42	38.21
Zm00001d034005_P003	Maize	plasma membrane	35.41	37.88
AT5G61020.1	Thale cress	cytosol	26.49	37.78
Bra039400.1-P	Field mustard	nucleus	33.99	37.74
KRH59123	Soybean	nucleus	37.11	37.01
KRH43005	Soybean	nucleus	36.97	36.92
Solyc01g028860.2.1	Tomato	nucleus	36.4	36.4
Bra038524.1-P	Field mustard	cytosol	11.33	35.56
PGSC0003DMT400061684	Potato	endoplasmic reticulum, plasma membrane	36.26	34.78
Bra018951.1-P	Field mustard	cytosol	12.75	34.75
KRG94807	Soybean	nucleus	32.15	34.45
Bra014253.1-P	Field mustard	cytosol	14.45	34.23
KRH70155	Soybean	nucleus	30.17	33.81
KRH06717	Soybean	nucleus	31.73	33.79
Zm00001d048424_P003	Maize	plastid	34.56	32.97
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	17.71	31.33
Zm00001d027731_P012	Maize	plastid	35.41	31.13
Zm00001d031981_P002	Maize	cytosol	27.9	30.26
Zm00001d024339_P001	Maize	extracellular	24.5	29.22
Zm00001d002372_P002	Maize	nucleus	22.8	29.17
Zm00001d049360_P004	Maize	extracellular	24.22	28.69
Zm00001d011602_P001	Maize	nucleus	24.65	28.57
Zm00001d047072_P001	Maize	mitochondrion	19.55	28.22
Zm00001d043860_P001	Maize	mitochondrion	25.21	26.37
Zm00001d038120_P001	Maize	cytosol	8.5	25.75
Zm00001d032562_P001	Maize	cytosol	8.92	22.74
Zm00001d051781_P001	Maize	cytosol, extracellular	7.93	22.31
Zm00001d010826_P001	Maize	cytosol	12.18	20.77
Zm00001d048501_P002	Maize	cytosol	22.24	20.71
Zm00001d049729_P008	Maize	cytosol	21.1	20.69
Zm00001d034996_P005	Maize	cytosol	19.83	20.35

Protein Annotations

EnsemblPlants:Zm00001d018896_P002	EnsemblPlants:Zm00001d018896_T002	EnsemblPlantsGene:Zm00001d018896	EntrezGene:100191952	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF34	PFAM:PF04146	PFscan:PS50882	ProteinID:ONM51587.1	SEG:seg	UniParc:UPI000844188F
UniProt:A0A1D6HT66	MapMan:16.5.2.1	:	:	:	:

Description

evolutionarily conserved C-terminal region 2

Coordinates

chr7:-:8603180..8607570

Molecular Weight (calculated)

78348.5 Da

IEP (calculated)

8.311

GRAVY (calculated)

-0.716

Length

706 amino acids

Sequence
(BLAST)

001: MLFRPFQAPA KGVMAAVGSL KPGMETLHVQ DYKDAPPAKA AVESLQPAME SLHVQDYKDA PPAKGVAAAA VGSLQPGAEN LQVQDYKDGN MYYGAYPAYA
101: YGAYGGWGEY PYLSHDGAQT PTAGTYADMY YGYAPYGVAT MGHDGQIYGS QNYQYPSTYT KQQNSTAKLS SNGISEKLTP APQTDVSTIG VDEVKGLKNS
201: NSVLKTDRNM PGSNGSYGRS SVRSGSYQNQ TSWSHYPYYS SEMFSDKQQK FTGNHNSTSN PKTKGQSRNQ NTRQYPHLMD GDIDEDVRCR ILVVWLKWLH
301: AFGVLYDKAV SKTRKFYRTV VGDVIWCGLL VDKKEGLQTP TSSVYSANGI YGYDGSYGPG LWYGSHMYNS GLYGGWNSLY DGKYRTRGRG NNGYYVYGNG
401: SIDGFNELKR GPRSGMYKNQ LGLEATTQAP AKEQDLLFAN GSHPAMKDQY NQADFAETYS DAKFFIIKSY SEDDVHKSVK YNVWASTPNG NKKLDAAYQE
501: AKEKSSETPV FLLFSVNASG QFVGLAEMVG RVDFEKTVEH WQQDKWTGCF PVKWHIVKDV PNSLLKHIIL ENNENKPVTN SRDTHEVKLE QGLQVLKIFK
601: DHVCKTSILD DFGFYDNREK MMQERKAKQQ QSLKKVIDVK LPSVTDMERS PKGETGSTEL TGVGTDVLNK ERLLGKAGEK NGEKGNDVAP QDLKTQTEKL
701: AGLNGC

Best Arabidopsis Sequence Match ( AT3G13460.1 )
(BLAST)

001: MATVAPPADQ ATDLLQKLSL DSPAKASEIP EPNKKTAVYQ YGGVDVHGQV PSYDRSLTPM LPSDAADPSV CYVPNPYNPY QYYNVYGSGQ EWTDYPAYTN
101: PEGVDMNSGI YGENGTVVYP QGYGYAAYPY SPATSPAPQL GGEGQLYGAQ QYQYPNYFPN SGPYASSVAT PTQPDLSANK PAGVKTLPAD SNNVASAAGI
201: TKGSNGSAPV KPTNQATLNT SSNLYGMGAP GGGLAAGYQD PRYAYEGYYA PVPWHDGSKY SDVQRPVSGS GVASSYSKSS TVPSSRNQNY RSNSHYTSVH
301: QPSSVTGYGT AQGYYNRMYQ NKLYGQYGST GRSALGYGSS GYDSRTNGRG WAATDNKYRS WGRGNSYYYG NENNVDGLNE LNRGPRAKGT KNQKGNLDDS
401: LEVKEQTGES NVTEVGEADN TCVVPDREQY NKEDFPVDYA NAMFFIIKSY SEDDVHKSIK YNVWASTPNG NKKLAAAYQE AQQKAGGCPI FLFFSVNASG
501: QFVGLAEMTG PVDFNTNVEY WQQDKWTGSF PLKWHIVKDV PNSLLKHITL ENNENKPVTN SRDTQEVKLE QGLKIVKIFK EHSSKTCILD DFSFYEVRQK
601: TILEKKAKQT QKQVSEEKVT DEKKESATAE SASKESPAAV QTSSDVKVAE NGSVAKPVTG DVVANGC

Arabidopsis Description

ECT2ECT2 [Source:UniProtKB/TrEMBL;Acc:A0A178VBC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.