Factsheet for Bra008509.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56132	Canola	nucleus	99.76	94.41
Bra004105.1-P	Field mustard	nucleus	71.87	76.77
AT5G61020.1	Thale cress	cytosol	66.19	56.57
Bra018951.1-P	Field mustard	cytosol	30.5	49.81
Bra038524.1-P	Field mustard	cytosol	25.53	48.0
Bra014253.1-P	Field mustard	cytosol	33.81	47.99
Bra031960.1-P	Field mustard	nucleus	37.12	39.65
Bra036423.1-P	Field mustard	nucleus	37.59	39.16
GSMUA_Achr4P14820_001	Banana	cytosol	26.48	33.84
EER93313	Sorghum	cytosol	43.74	32.34
Bra027432.1-P	Field mustard	nucleus	48.46	32.33
GSMUA_Achr7P01490_001	Banana	nucleus	42.79	32.32
Bra001506.1-P	Field mustard	nucleus	48.46	32.08
Bra039400.1-P	Field mustard	nucleus	46.34	30.82
GSMUA_Achr4P22630_001	Banana	nucleus	45.15	30.76
Os07t0170300-01	Rice	plasma membrane	43.74	30.73
TraesCS5A01G431200.1	Wheat	nucleus	42.79	30.73
VIT_08s0007g07450.t01	Wine grape	cytosol	50.12	30.55
Bra008406.1-P	Field mustard	cytosol	32.15	30.36
TraesCS5D01G439100.1	Wheat	nucleus	42.08	30.27
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	43.97	30.24
Bra035104.1-P	Field mustard	cytosol	31.44	30.02
GSMUA_Achr4P21380_001	Banana	nucleus	46.57	29.94
TraesCS5B01G433000.1	Wheat	cytosol	41.61	29.53
GSMUA_Achr5P02830_001	Banana	cytosol	42.32	29.06
TraesCS5A01G431100.1	Wheat	cytosol	43.74	28.82
TraesCS5D01G439200.1	Wheat	cytosol	43.74	28.82
KRH70155	Soybean	nucleus	42.79	28.73
TraesCS5B01G432900.2	Wheat	extracellular	43.97	28.7
TraesCS5A01G386600.2	Wheat	nucleus	44.92	28.66
GSMUA_Achr7P27220_001	Banana	cytosol	44.68	28.59
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	44.92	28.57
TraesCS5B01G391500.1	Wheat	nucleus	44.68	28.55
EER93461	Sorghum	nucleus	44.44	28.53
TraesCS5D01G396400.3	Wheat	nucleus	44.44	28.4
KRG94807	Soybean	nucleus	44.21	28.38
KXG34475	Sorghum	cytosol	43.03	28.17
KRH06717	Soybean	nucleus	43.97	28.05
Zm00001d034005_P003	Maize	plasma membrane	43.74	28.03
Os03t0748000-01	Rice	plasma membrane	43.74	27.99
Bra003615.1-P	Field mustard	nucleus	32.86	27.31
HORVU5Hr1G104380.1	Barley	plastid	42.55	27.23
Os03t0158500-01	Rice	nucleus	45.39	27.16
Zm00001d007890_P002	Maize	mitochondrion	41.61	26.95
Bra034710.1-P	Field mustard	nucleus	37.83	26.94
HORVU5Hr1G104390.3	Barley	plastid	43.26	26.6
KXG40139	Sorghum	plastid	44.68	26.58
Bra039366.1-P	Field mustard	nucleus	37.59	26.46
TraesCS4D01G273200.4	Wheat	cytosol	44.44	26.0
TraesCS4A01G031600.2	Wheat	cytosol	44.44	25.79
Bra010911.1-P	Field mustard	nucleus	31.68	25.72
Zm00001d018896_P002	Maize	mitochondrion	42.79	25.64
Zm00001d048424_P003	Maize	plastid	44.44	25.41
Bra019988.1-P	Field mustard	nucleus	30.02	25.35
HORVU4Hr1G072940.4	Barley	cytosol	44.21	25.2
TraesCS4B01G274500.2	Wheat	plastid	44.21	24.38
Bra006780.1-P	Field mustard	cytosol	28.84	23.97
Zm00001d027731_P012	Maize	plastid	44.44	23.41
Bra020382.1-P	Field mustard	nucleus	28.61	21.88
Bra018708.1-P	Field mustard	nucleus	30.5	21.22

Protein Annotations

EnsemblPlants:Bra008509.1	EnsemblPlants:Bra008509.1-P	EnsemblPlantsGene:Bra008509	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI0002546E2F	UniProt:M4CWB2	MapMan:16.5.2.1

Description

AT5G61020 (E=6e-105) ECT3 | ECT3

Coordinates

chrA02:-:16055865..16057548

Molecular Weight (calculated)

47742.8 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.837

Length

423 amino acids

Sequence
(BLAST)

001: MVKVPDTGNK DVYGGTKTGK TNLLPNNVRA VTGLNQKKLA FNQKGSYGTY PTGYYTPPYQ YPRYGYDMNY ASGKTNISLQ YPHLSTYQGR SGSYGQSFGY
101: NMDSMYSMYG PYMSGYGYDS YGYGAYKQTP SWYKTMAYGF SGYGKENFAG LDELNRGPRA KGFKIGQESS QPETLKEQEI EKKTSEDVSL PDSKDYNKED
201: FSETYSNAKL FVIKSYSEDD IHKSIKYNVW SSTPNGNKKL DAAYNEAKEK SNGSCPVFLM FSVNTSGQFV GLAEMVGPVD FNQTVEYWQQ DKWIGCFPVK
301: WHIVKDIPNS SLRHITLENN ENKPVTNSRD TQEVNLEQCM KVIKIFKEHA SKTCILDDFV FYESREKIIK EGKKKQQQYK KKQALAAIDK KATPKDETKE
401: TSTAPQVASE ISQNGVAEVA SAC

Best Arabidopsis Sequence Match ( AT5G61020.2 )
(BLAST)

001: MANPDHVSDV LHNLSIDPTT KALAPDSETK GAYGGNGNDF LLNDELVEAT KIGKPSLLSK DGGVTKDKGS NLKKLGYQSA AYNAKGSYGK GAYAYGYYPP
101: AYQYPRHGYT GSYASGKTNL QYQYLTQQGR SAGNGQSYGG YMDNIYSNYG MCGPYTNGYG YGSYGYDSWK YMPNWYAVNN TYKPRNGYHG YGKENIEGLN
201: EMNRGPRAKG FNSQDGSKVM AVSLKEQRVT ETEKLSEDVS LLDPKDYNKI DFPETYTEAK FYVIKSYSED DIHKSIKYSV WSSTPNGNKK LDASYNEAKQ
301: KSDGCPVFLL FSVNTSGQFV GLAEMVGPVD FNKTVEYWQQ DKWIGCFPVK WHFVKDIPNS SLRHITLENN ENKPVTNSRD TQEVKLEQGI KVIKIFKDHA
401: SKTCILDDFE FYENRQKIIQ ERKSKHLQIK KQTLVANADK GVMSKINLVK PQESTTASED AAALGVAAEV TKESKVVKET ELPVEKNAVA TAC

Arabidopsis Description

ECT3ECT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.