Factsheet for Bra018708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93645	Canola	nucleus	97.37	96.73
AT1G48110.2	Thale cress	nucleus	76.97	73.24
KRH36908	Soybean	cytosol	38.32	52.48
VIT_05s0020g00460.t01	Wine grape	cytosol	49.51	42.16
KRH02430	Soybean	cytosol	47.86	41.93
KRH50636	Soybean	cytosol	47.53	41.58
Solyc12g099090.1.1	Tomato	cytosol	45.39	40.0
PGSC0003DMT400011739	Potato	cytosol	45.07	39.2
KRH11876	Soybean	endoplasmic reticulum	44.57	38.66
Bra035104.1-P	Field mustard	cytosol	25.82	35.44
Bra008406.1-P	Field mustard	cytosol	25.33	34.38
Bra031960.1-P	Field mustard	nucleus	20.89	32.07
Bra004105.1-P	Field mustard	nucleus	20.89	32.07
Bra036423.1-P	Field mustard	nucleus	21.05	31.53
Bra003615.1-P	Field mustard	nucleus	26.15	31.24
Bra008509.1-P	Field mustard	cytosol	21.22	30.5
Os03t0317000-01	Rice	plasma membrane	34.87	29.9
Bra018951.1-P	Field mustard	cytosol	12.5	29.34
Bra039400.1-P	Field mustard	nucleus	30.59	29.25
Bra034710.1-P	Field mustard	nucleus	28.45	29.12
Bra014253.1-P	Field mustard	cytosol	13.98	28.52
Bra027432.1-P	Field mustard	nucleus	29.44	28.23
Bra039366.1-P	Field mustard	nucleus	27.8	28.12
Bra001506.1-P	Field mustard	nucleus	29.44	28.01
GSMUA_Achr1P24980_001	Banana	nucleus	38.16	27.95
Bra006780.1-P	Field mustard	cytosol	23.36	27.9
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	32.4	27.59
TraesCS4D01G180500.5	Wheat	cytosol, nucleus, plastid	32.24	27.49
TraesCS4A01G125600.3	Wheat	cytosol, nucleus, plastid	32.24	27.26
Bra010911.1-P	Field mustard	nucleus	23.19	27.06
GSMUA_Achr8P29890_001	Banana	cytosol	35.53	26.63
Bra038524.1-P	Field mustard	cytosol	9.7	26.22
Bra019988.1-P	Field mustard	nucleus	21.55	26.15
HORVU4Hr1G052390.3	Barley	golgi	31.74	25.73
Os01t0329800-01	Rice	cytosol	29.28	25.14
Bra020382.1-P	Field mustard	nucleus	22.53	24.77
TraesCS3B01G232300.2	Wheat	cytosol	27.8	24.6
TraesCS3A01G199100.2	Wheat	cytosol	27.8	24.53
TraesCS3D01G199400.2	Wheat	cytosol	27.63	24.42
KXG24185	Sorghum	nucleus	28.95	24.01
Zm00001d034996_P005	Maize	cytosol	27.14	23.98
Zm00001d049729_P008	Maize	cytosol	28.29	23.89
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	24.84	23.09
Zm00001d010826_P001	Maize	cytosol	15.62	22.95
TraesCS1B01G128700.1	Wheat	cytosol	26.48	22.9
TraesCS1A01G105700.1	Wheat	cytosol	26.15	22.65
TraesCS1D01G109300.1	Wheat	cytosol	26.15	22.52
OQU77486	Sorghum	cytosol	25.99	22.32

Protein Annotations

EnsemblPlants:Bra018708.1	EnsemblPlants:Bra018708.1-P	EnsemblPlantsGene:Bra018708	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003729	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF22	PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI000253ED67	UniProt:M4DQB5
MapMan:16.5.2.1	:	:	:	:	:

Description

AT1G48110 (E=6e-168) ECT7 | ECT7 (evolutionarily conserved C-terminal region 7)

Coordinates

chrA06:+:2415096..2417384

Molecular Weight (calculated)

67138.4 Da

IEP (calculated)

6.657

GRAVY (calculated)

-0.790

Length

608 amino acids

Sequence
(BLAST)

001: MYTSEGAQAP DFVADQGIYY HPVDPNYAYY CTGYESPGEW ENHQMFFGVD GSQLQYQGGQ NENSPYIYYT PSYGYAQSPY NPFNPYIPGA DSPFQQYYPP
101: LPPYQNVASS GAFVPYAAAH PDTVSSSSAN SLVETGSAAN RRGSRNRNAS AADGIQRNAS EKPRPNPGGQ NRSLSTEKRV STAFPALQGK AISVSTQPVE
201: AVSSSRVSSS GQLDIAPPPE RNGLSSTATN NNNPRPKLYG VHSNISSRSK GPRSQLIVKA YTTKAGNADA EGNIVIDPNQ YNKEDLRIDY TNAKFFVIKS
301: YSEDDVHKSI KYSVWSSTLH GNKKLQSAYE DAQRIATEKS CECPIFLFFS VNASGLFCGM AEMTGPVSFE KDMDFWQQDK WSGSFPVKWH IIKDVPNSYF
401: RHIILHNNEN KPVTNSRDTQ EIMMKQGLEV LKIFKGHAER TSLLDDFAYY ENRQRVMHDE RNRLPYRSFL SPVPVPRPDF SDRNKKNSSE DPSKSDGNEE
501: TTTVKEGTKE DTTTLIQKKI TSLTVSPTDT DSNPTTGSHL NQSQAKSKPP PSVSDKKTDP DPPEAVDSPL SEDNDTVKVG SLPIKVTGSP PIVTVGTIPL
601: DPSSLQKK

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.