Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G109300.1 | Wheat | cytosol | 94.87 | 94.33 |
| TraesCS1B01G128700.1 | Wheat | cytosol | 94.44 | 94.31 |
| Zm00001d010826_P001 | Maize | cytosol | 30.06 | 50.97 |
| OQU77486 | Sorghum | cytosol | 49.86 | 49.44 |
| TraesCS3A01G199100.2 | Wheat | cytosol | 40.17 | 40.93 |
| KRH36908 | Soybean | cytosol | 21.23 | 33.56 |
| Bra018708.1-P | Field mustard | nucleus | 22.65 | 26.15 |
| CDX93645 | Canola | nucleus | 22.36 | 25.65 |
| CDY43306 | Canola | cytosol | 22.22 | 25.45 |
| VIT_05s0020g00460.t01 | Wine grape | cytosol | 24.93 | 24.51 |
| AT3G17330.1 | Thale cress | nucleus | 20.66 | 24.37 |
| KRH50636 | Soybean | cytosol | 23.93 | 24.17 |
| KRH02430 | Soybean | cytosol | 23.79 | 24.06 |
| KRH11876 | Soybean | endoplasmic reticulum | 23.79 | 23.82 |
| AT1G48110.2 | Thale cress | nucleus | 21.23 | 23.32 |
| Solyc12g099090.1.1 | Tomato | cytosol | 22.79 | 23.19 |
| PGSC0003DMT400011739 | Potato | cytosol | 22.65 | 22.75 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 20.23 | 22.72 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 18.95 | 22.54 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 20.23 | 22.12 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 18.23 | 21.73 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 19.8 | 20.97 |
| TraesCS3A01G267700.1 | Wheat | nucleus | 19.66 | 19.97 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 17.81 | 19.47 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 19.8 | 19.07 |
| TraesCS4A01G125600.3 | Wheat | cytosol, nucleus, plastid | 19.23 | 18.78 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 18.09 | 17.86 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G105700.1 | EnsemblPlantsGene:TraesCS1A01G105700 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF26 | PFAM:PF04146 |
| PFscan:PS50882 | MapMan:16.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:102164806..102170320
Molecular Weight (calculated)
77788.3 Da
IEP (calculated)
8.585
GRAVY (calculated)
-0.464
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLEANSELI FGEEFCFPAN ATYYPTPYGP TGITLPAELY EHQAIWRCGD QDLHYLGQQA EGTSYSYYVV PDYGIAHSPR GPYPSEHCTI ADGRFARSRE
101: YLAKTADIAC HQPVPIPHYD VLPPAAQWGP ASTSQTLTFN DSLFIPTDQG QSFPAVPKKG ITWNPSLQST SVSSKKFENH AMLSTVQLHS TDSWKQNLAA
201: GSRTMVPAKL HRALQASRHS LHGGVPPVKS SPQTNPSYNY NASHVGSDLR KMAMAEKFQP SSKPRSHVNG LTGKLSSVCW PNLSKEKQPR GSMSSEIVAT
301: SYTSKLHIGN PEGKIIIKTD QYNRDDFEVV YPNAKFFVIK SWGEANVHKS IKYGVWSSGL QGNKKLDSAF RDAQMIAASS STLCPVFLFF SVNESNHFCG
401: VAEMVGPVDF QKGDMDFWSM DRWVGSFPVR WHIIKNIPNV ALKCILLRNN EDKPVTSSKN TQEVHYVPGT SMLRIFKGSK TNGCLLDCFT MYEAEEAKCR
501: MSKLRRDAPR FIRVPKLSLR HAYVPRQPKA DRILMDRIIR ETHDLAGKGM QQSSWEESGN LARYSATASA QKENRSYGKP AREDVVKAVI YQQPLASNMP
601: AAPAGGQLTW EKVEVGPVEK DRPQIAANIS SKAPEENPTE VNNALVHSAS SSTPETIYEE KKIIGEHCAR AVSPPMSEAC SSCLIGDVLR IGSMLVPMKM
701: PN
101: YLAKTADIAC HQPVPIPHYD VLPPAAQWGP ASTSQTLTFN DSLFIPTDQG QSFPAVPKKG ITWNPSLQST SVSSKKFENH AMLSTVQLHS TDSWKQNLAA
201: GSRTMVPAKL HRALQASRHS LHGGVPPVKS SPQTNPSYNY NASHVGSDLR KMAMAEKFQP SSKPRSHVNG LTGKLSSVCW PNLSKEKQPR GSMSSEIVAT
301: SYTSKLHIGN PEGKIIIKTD QYNRDDFEVV YPNAKFFVIK SWGEANVHKS IKYGVWSSGL QGNKKLDSAF RDAQMIAASS STLCPVFLFF SVNESNHFCG
401: VAEMVGPVDF QKGDMDFWSM DRWVGSFPVR WHIIKNIPNV ALKCILLRNN EDKPVTSSKN TQEVHYVPGT SMLRIFKGSK TNGCLLDCFT MYEAEEAKCR
501: MSKLRRDAPR FIRVPKLSLR HAYVPRQPKA DRILMDRIIR ETHDLAGKGM QQSSWEESGN LARYSATASA QKENRSYGKP AREDVVKAVI YQQPLASNMP
601: AAPAGGQLTW EKVEVGPVEK DRPQIAANIS SKAPEENPTE VNNALVHSAS SSTPETIYEE KKIIGEHCAR AVSPPMSEAC SSCLIGDVLR IGSMLVPMKM
701: PN
001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
Arabidopsis Description
ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.