Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 2
- plasma membrane 1
- cytosol 1
- mitochondrion 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G48110.2 | Thale cress | nucleus | 63.03 | 58.69 |
| KRH36908 | Soybean | cytosol | 36.81 | 49.32 |
| VIT_05s0020g00460.t01 | Wine grape | cytosol | 50.08 | 41.74 |
| KRH02430 | Soybean | cytosol | 45.04 | 38.62 |
| KRH50636 | Soybean | cytosol | 44.03 | 37.7 |
| Solyc12g099090.1.1 | Tomato | cytosol | 43.7 | 37.68 |
| PGSC0003DMT400011739 | Potato | cytosol | 43.87 | 37.34 |
| KRH11876 | Soybean | endoplasmic reticulum | 43.87 | 37.23 |
| AT3G03950.3 | Thale cress | cytosol | 22.52 | 31.31 |
| Os03t0317000-01 | Rice | plasma membrane | 35.29 | 29.62 |
| AT1G09810.1 | Thale cress | nucleus | 23.36 | 29.57 |
| AT1G79270.1 | Thale cress | nucleus | 25.88 | 29.17 |
| TraesCS4B01G179100.3 | Wheat | cytosol, nucleus, plastid | 34.29 | 28.57 |
| TraesCS4D01G180500.5 | Wheat | cytosol, nucleus, plastid | 33.95 | 28.33 |
| AT5G61020.1 | Thale cress | cytosol | 23.36 | 28.08 |
| TraesCS4A01G125600.3 | Wheat | cytosol, nucleus, plastid | 33.78 | 27.96 |
| AT1G55500.5 | Thale cress | cytosol | 28.4 | 27.93 |
| AT3G13460.1 | Thale cress | cytosol | 31.26 | 27.89 |
| AT3G13060.2 | Thale cress | nucleus | 29.41 | 27.6 |
| GSMUA_Achr1P24980_001 | Banana | nucleus | 38.15 | 27.35 |
| HORVU4Hr1G052390.3 | Barley | golgi | 33.45 | 26.53 |
| GSMUA_Achr8P29890_001 | Banana | cytosol | 35.29 | 25.89 |
| AT5G58190.2 | Thale cress | nucleus | 22.86 | 25.76 |
| AT1G27960.1 | Thale cress | cytosol | 22.52 | 24.86 |
| Os01t0329800-01 | Rice | cytosol | 28.4 | 23.87 |
| Zm00001d010826_P001 | Maize | cytosol | 16.47 | 23.67 |
| TraesCS3B01G232300.2 | Wheat | cytosol | 26.89 | 23.29 |
| TraesCS3A01G199100.2 | Wheat | cytosol | 26.89 | 23.22 |
| TraesCS3D01G199400.2 | Wheat | cytosol | 26.72 | 23.11 |
| Zm00001d034996_P005 | Maize | cytosol | 26.22 | 22.67 |
| Zm00001d049729_P008 | Maize | cytosol | 27.06 | 22.36 |
| HORVU3Hr1G045890.2 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 24.54 | 22.32 |
| KXG24185 | Sorghum | nucleus | 27.23 | 22.1 |
| TraesCS1B01G128700.1 | Wheat | cytosol | 25.55 | 21.62 |
| TraesCS1D01G109300.1 | Wheat | cytosol | 24.87 | 20.96 |
| OQU77486 | Sorghum | cytosol | 24.87 | 20.9 |
| TraesCS1A01G105700.1 | Wheat | cytosol | 24.37 | 20.66 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:820996 | ProteinID:AEE75938.1 | ProteinID:ANM65623.1 | ArrayExpress:AT3G17330 |
| EnsemblPlantsGene:AT3G17330 | RefSeq:AT3G17330 | TAIR:AT3G17330 | RefSeq:AT3G17330-TAIR-G | EnsemblPlants:AT3G17330.1 | TAIR:AT3G17330.1 |
| Unigene:At.38744 | EMBL:BT025338 | Symbol:ECT6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0005488 | InterPro:IPR007275 | RefSeq:NP_001327579.1 | RefSeq:NP_188359.2 | PFAM:PF04146 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50882 | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF22 | UniProt:Q1JPL5 | UniParc:UPI0000196D0A | InterPro:YTH_domain |
| SEG:seg | : | : | : | : | : |
Description
ECT6At3g17330 [Source:UniProtKB/TrEMBL;Acc:Q1JPL5]
Coordinates
chr3:-:5916940..5920281
Molecular Weight (calculated)
65653.0 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.682
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MYTEGASDFV IDQSMYYPAY YSSGYDSSVG LQGGQNENAP YICYTPSYGY AQSPYNPYNP YIPGASIGVD SSFVGFQQYY SDPPYESAAS SPTYVPYVIQ
101: PDMVSNSSTD SLVANGGQSD GRGSMQRNGS AIAGLPKDAP KSTTTGQYKQ PGIPKNVSTT ASAHSLQGKT AYANTLLPYG KSDIANGVSS IASYSYKPCS
201: KIYDARGDNN TTGSTYTSEQ NRGSRTRRSR NQLIVKAYTT KAGNADAEGN IVINPDRYNK EDFSIEYSDA RFFVIKSYSE DDVHKSIKYG VWSSTLNGNK
301: KLQSVYEDAQ RIATEKSREC PIFLFFSVNS SGLFCGVAEM TGPVSFDRDM DFWQQDKWSG SFPVKWHIIK DVPNSYFRHI ILHNNENKPV TNSRDTQEII
401: LKQGLEVLKL FKHHAEKTSL LDDFMYYEDR QRLMQEERAR LPFRTFRRPF PVLNLDFSDR SKKSSKDVVK KPSVTSAETK VVQLKNSDGD EKSNTQEATD
501: DSTPSTLKFG SLAIKPTAGT TFNPTQPKPK PTPSLGSDHK SDSSEEVTGS LADDIVSVGS LPIKVKGSKE LSSKIAAVGT SPLSTQDQFR SKPGF
101: PDMVSNSSTD SLVANGGQSD GRGSMQRNGS AIAGLPKDAP KSTTTGQYKQ PGIPKNVSTT ASAHSLQGKT AYANTLLPYG KSDIANGVSS IASYSYKPCS
201: KIYDARGDNN TTGSTYTSEQ NRGSRTRRSR NQLIVKAYTT KAGNADAEGN IVINPDRYNK EDFSIEYSDA RFFVIKSYSE DDVHKSIKYG VWSSTLNGNK
301: KLQSVYEDAQ RIATEKSREC PIFLFFSVNS SGLFCGVAEM TGPVSFDRDM DFWQQDKWSG SFPVKWHIIK DVPNSYFRHI ILHNNENKPV TNSRDTQEII
401: LKQGLEVLKL FKHHAEKTSL LDDFMYYEDR QRLMQEERAR LPFRTFRRPF PVLNLDFSDR SKKSSKDVVK KPSVTSAETK VVQLKNSDGD EKSNTQEATD
501: DSTPSTLKFG SLAIKPTAGT TFNPTQPKPK PTPSLGSDHK SDSSEEVTGS LADDIVSVGS LPIKVKGSKE LSSKIAAVGT SPLSTQDQFR SKPGF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.