CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02430	Soybean	cytosol	93.09	93.23
KRH36908	Soybean	cytosol	48.2	75.45
KRH11876	Soybean	endoplasmic reticulum	67.05	66.48
VIT_05s0020g00460.t01	Wine grape	cytosol	63.31	61.62
KRH26322	Soybean	cytosol	9.93	53.91
PGSC0003DMT400011739	Potato	cytosol	52.66	52.36
Solyc12g099090.1.1	Tomato	cytosol	51.51	51.88
Bra018708.1-P	Field mustard	nucleus	41.58	47.53
CDX93645	Canola	nucleus	41.3	46.9
AT1G48110.2	Thale cress	nucleus	42.73	46.48
CDY43306	Canola	cytosol	40.72	46.17
AT3G17330.1	Thale cress	nucleus	37.7	44.03
Os03t0317000-01	Rice	plasma membrane	34.24	33.57
KRH43645	Soybean	nucleus	27.05	32.47
KRH13810	Soybean	nucleus, plastid	26.76	32.24
GSMUA_Achr8P29890_001	Banana	cytosol	37.41	32.06
GSMUA_Achr1P24980_001	Banana	nucleus	37.99	31.81
TraesCS4D01G180500.5	Wheat	cytosol, nucleus, plastid	32.52	31.7
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	32.52	31.65
KRH46969	Soybean	endoplasmic reticulum, extracellular	29.35	31.53
KRH44697	Soybean	mitochondrion	29.78	31.46
TraesCS4A01G125600.3	Wheat	cytosol, nucleus, plastid	32.52	31.43
KRH59123	Soybean	nucleus	31.65	31.07
KRH43005	Soybean	nucleus	31.51	30.98
HORVU4Hr1G052390.3	Barley	golgi	31.8	29.47
KRH06073	Soybean	cytosol, nucleus, peroxisome	20.86	29.23
KRG94807	Soybean	nucleus	26.91	28.38
KRH70155	Soybean	nucleus	25.18	27.78
KRH06717	Soybean	nucleus	26.47	27.75
Os01t0329800-01	Rice	cytosol	27.05	26.55
Zm00001d034996_P005	Maize	cytosol	25.47	25.73
Zm00001d049729_P008	Maize	cytosol	26.47	25.56
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	24.03	25.54
KXG24185	Sorghum	nucleus	26.76	25.38
TraesCS3A01G199100.2	Wheat	cytosol	25.04	25.25
TraesCS3D01G199400.2	Wheat	cytosol	24.75	25.0
TraesCS3B01G232300.2	Wheat	cytosol	24.6	24.89
TraesCS1B01G128700.1	Wheat	cytosol	24.6	24.32
TraesCS1D01G109300.1	Wheat	cytosol	24.32	23.94
TraesCS1A01G105700.1	Wheat	cytosol	24.17	23.93
Zm00001d010826_P001	Maize	cytosol	14.1	23.67
OQU77486	Sorghum	cytosol	21.44	21.05

Protein Annotations

EMBL:ACUP02004709	EnsemblPlants:KRH50636	EnsemblPlantsGene:GLYMA_07G233400	EntrezGene:100777489	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF22	PFAM:PF04146	PFscan:PS50882	ProteinID:KRH50636	ProteinID:KRH50636.1	SEG:seg
UniParc:UPI00023C6342	UniProt:I1KMJ7	MapMan:16.5.2.1	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:41461083..41466229

Molecular Weight (calculated)

76829.9 Da

IEP (calculated)

6.418

GRAVY (calculated)

-0.516

Length

695 amino acids

Sequence
(BLAST)

001: MEMYDVSQTR NADAYLIEGT DLNSHLTSPN IQQFQAMFND GAPEFVVDQN LYYPAATNYG YYCTGFESPG EWEDHHRIFG VDGPDIQYTG AQNESFPYIY
101: YTPSYGFAQS PYNPYNPYIP GAMIGVDGSF GGAEQYYSLP NYQNPISSHA YIPLVQPDNF PNSSVDSLFD TRASVSRPDG KGLKPKFNSA SVSFTRNSSK
201: SLSNPTSSLP RISEGPRDYT GVKKDMTSGR GFLNMASSPV HQARSIDAST HPVDTISNGN VLSHHNQLKI ASSLSSGFSD YGSNANGQSV VAKLRPKVHI
301: GKGLSDVNGS SDVLGEQNRG PRISNCKSKF PLAVKAYTNI GDGNTQENII ISTDQYNRED FPVNYENAKF FVIKSYSEDD VHKSIKYNVW SSTPHGNKKL
401: QSAHEDAKRI ASGKFGSCPI FLFFSVNASG QFCGVAEMIG PVDFNKDMDF WQQDKWSGSF PVKWYIIKDV SNANFRHIIL ENNENKPVTN SRDTQEIMYS
501: KGLEMLKIFK NHHLKTSLLD DFIYYENRQK IMLEEKTKLL IRSFENPLML PTLEPPRKLN FVVDIPPVSV EKKAKMDDEF DSLKQTSSAG HIVSSSEVTS
601: TASVDEKAEK GSVEKEDIAS VLKIGSVTIT PKQVETKPSG ISVANKEPLD VITVGSMQVK VNGFAESSGL LKIGSIPLDP RTLQLDGGTR VKNGS

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.