Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G199400.2 | Wheat | cytosol | 97.53 | 97.38 |
| TraesCS3A01G199100.2 | Wheat | cytosol | 97.23 | 96.95 |
| HORVU3Hr1G045890.2 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 82.1 | 86.24 |
| Os01t0329800-01 | Rice | cytosol | 65.65 | 63.7 |
| Zm00001d034996_P005 | Maize | cytosol | 59.53 | 59.45 |
| KXG24185 | Sorghum | nucleus | 62.45 | 58.53 |
| Zm00001d049729_P008 | Maize | cytosol | 60.55 | 57.78 |
| TraesCS1B01G128700.1 | Wheat | cytosol | 40.61 | 39.69 |
| KRH36908 | Soybean | cytosol | 22.56 | 34.91 |
| CDX93645 | Canola | nucleus | 24.89 | 27.94 |
| Bra018708.1-P | Field mustard | nucleus | 24.6 | 27.8 |
| CDY43306 | Canola | cytosol | 24.75 | 27.73 |
| AT3G17330.1 | Thale cress | nucleus | 23.29 | 26.89 |
| Solyc12g099090.1.1 | Tomato | cytosol | 26.64 | 26.52 |
| VIT_05s0020g00460.t01 | Wine grape | cytosol | 27.37 | 26.33 |
| AT1G48110.2 | Thale cress | nucleus | 24.31 | 26.13 |
| KRH02430 | Soybean | cytosol | 26.2 | 25.94 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 22.42 | 25.84 |
| PGSC0003DMT400011739 | Potato | cytosol | 25.91 | 25.46 |
| KRH50636 | Soybean | cytosol | 24.89 | 24.6 |
| KRH11876 | Soybean | endoplasmic reticulum | 24.6 | 24.11 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 22.71 | 23.57 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 21.54 | 22.84 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 19.36 | 22.47 |
| TraesCS4B01G179100.3 | Wheat | cytosol, nucleus, plastid | 23.29 | 22.41 |
| TraesCS3B01G301100.1 | Wheat | nucleus | 22.42 | 22.38 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 20.67 | 22.12 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 19.21 | 22.04 |
| TraesCS4B01G274500.2 | Wheat | plastid | 24.31 | 21.77 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 20.38 | 19.61 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G232300.2 | EnsemblPlantsGene:TraesCS3B01G232300 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF26 | PFAM:PF04146 |
| PFscan:PS50882 | SEG:seg | MapMan:16.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:354943502..354946989
Molecular Weight (calculated)
75756.3 Da
IEP (calculated)
7.595
GRAVY (calculated)
-0.497
Length
687 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPELLYGQN VYVPTAVNSY TYGYAEVGSP MDWYNHRNSL GYDAQDVYFP AFQTDGTQVV YYATPDNGSV HPSYSPYPMD PGYIIDGSYL PQEYVPDTDP
101: TCQVVPSSYY IPSVLPYAVD SVLGITATSL HPSSVAFIPS MPAYAVTSTN HVLPSMALVA PKNDVVVNPP VQSTIVSSKQ FQNHSMIPIV QLHNSLPMKQ
201: ELGNGSMVSI KPLHTPQAPT NVLDRPMAAA KHSPKAKLSG NDCFACVGSD PQKWASAEKF QPTSKSSGQL KAHGSSNAEK HSGQRSPAIV AKSYTSRLIV
301: GNLDGTILIR PDQYNGNDLQ VDNPYAKFFV IKSIGEADIH KSIKYGVWSS SSSGNSKLDC AYRDADRIAK RNSTKCPVFL FFSVNGSGHF CGLAEMVGPV
401: DFHKDMDFWC QDKWTGCFPV RWHIIKDVPN YTLQNILLQN NENKPVTHSR DTQEVPYVPG ISVLKILKDI KVKECLFDDF MRYEEDEARI KQRRWSKLSH
501: NAPDFVPVSQ RKSDASDLQL PKFGGVLIDR TLEIQNMSEK PHDCNGIKQQ DAVEKQVGSE AGKENGHQEN RCYGKQDNDK APRSSTSQPQ TSTLKMSMDG
601: KQQYWKKVEN PKPNPDGAGH GSSKLRESGV NISYAIVRLE APEDDSIVAK VGSLTISSKT KKAEDKSPLV DVVTIGSLPI RVNKSVA
101: TCQVVPSSYY IPSVLPYAVD SVLGITATSL HPSSVAFIPS MPAYAVTSTN HVLPSMALVA PKNDVVVNPP VQSTIVSSKQ FQNHSMIPIV QLHNSLPMKQ
201: ELGNGSMVSI KPLHTPQAPT NVLDRPMAAA KHSPKAKLSG NDCFACVGSD PQKWASAEKF QPTSKSSGQL KAHGSSNAEK HSGQRSPAIV AKSYTSRLIV
301: GNLDGTILIR PDQYNGNDLQ VDNPYAKFFV IKSIGEADIH KSIKYGVWSS SSSGNSKLDC AYRDADRIAK RNSTKCPVFL FFSVNGSGHF CGLAEMVGPV
401: DFHKDMDFWC QDKWTGCFPV RWHIIKDVPN YTLQNILLQN NENKPVTHSR DTQEVPYVPG ISVLKILKDI KVKECLFDDF MRYEEDEARI KQRRWSKLSH
501: NAPDFVPVSQ RKSDASDLQL PKFGGVLIDR TLEIQNMSEK PHDCNGIKQQ DAVEKQVGSE AGKENGHQEN RCYGKQDNDK APRSSTSQPQ TSTLKMSMDG
601: KQQYWKKVEN PKPNPDGAGH GSSKLRESGV NISYAIVRLE APEDDSIVAK VGSLTISSKT KKAEDKSPLV DVVTIGSLPI RVNKSVA
001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
Arabidopsis Description
ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.