Factsheet for HORVU3Hr1G045890.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

peroxisome 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	endoplasmic reticulum, peroxisome, plasma membrane
MultiLoc:	peroxisome
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G199100.2	Wheat	cytosol	86.85	82.44
TraesCS3D01G199400.2	Wheat	cytosol	86.7	82.41
TraesCS3B01G232300.2	Wheat	cytosol	86.24	82.1
Os01t0329800-01	Rice	cytosol	64.37	59.46
Zm00001d034996_P005	Maize	cytosol	58.26	55.38
KXG24185	Sorghum	nucleus	60.7	54.16
Zm00001d049729_P008	Maize	cytosol	58.56	53.19
KRH36908	Soybean	cytosol	23.85	35.14
AT1G48110.2	Thale cress	nucleus	24.62	25.2
CDY43306	Canola	cytosol	23.55	25.12
KRH02430	Soybean	cytosol	26.45	24.93
CDX93645	Canola	nucleus	23.24	24.84
Bra018708.1-P	Field mustard	nucleus	23.09	24.84
AT3G17330.1	Thale cress	nucleus	22.32	24.54
VIT_05s0020g00460.t01	Wine grape	cytosol	26.61	24.37
Solyc12g099090.1.1	Tomato	cytosol	25.38	24.06
KRH50636	Soybean	cytosol	25.54	24.03
PGSC0003DMT400011739	Potato	cytosol	25.08	23.46
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	23.39	23.01
KRH11876	Soybean	endoplasmic reticulum	24.31	22.68
HORVU5Hr1G104380.1	Barley	plastid	22.32	22.09
HORVU7Hr1G069070.2	Barley	cytosol	19.88	22.03
HORVU4Hr1G072940.4	Barley	cytosol	24.46	21.56
HORVU5Hr1G104390.3	Barley	plastid	22.17	21.08
HORVU1Hr1G008330.2	Barley	nucleus	20.64	21.03
HORVU4Hr1G052390.3	Barley	golgi	23.09	20.13
HORVU7Hr1G058250.46	Barley	cytosol, plastid	14.07	19.41
HORVU2Hr1G023660.2	Barley	nucleus	20.95	19.32
HORVU3Hr1G062620.8	Barley	mitochondrion	22.63	19.1
HORVU2Hr1G001810.8	Barley	cytosol	21.25	17.64

Protein Annotations

EnsemblPlants:HORVU3Hr1G045890.2	EnsemblPlantsGene:HORVU3Hr1G045890	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR007275	InterPro:YTH_domain
PANTHER:PTHR12357	PANTHER:PTHR12357:SF26	PFAM:PF04146	PFscan:PS50882	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B487AFA	UniProt:A0A287KXR7	MapMan:16.5.2.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:302784731..302789641

Molecular Weight (calculated)

72664.0 Da

IEP (calculated)

7.190

GRAVY (calculated)

-0.439

Length

654 amino acids

Sequence
(BLAST)

001: MEMEMTPELL YGQNVYVPAT VNSYTYGYAG KILICIILFM VFFTSLPVPS GYNTVLLNAE VGSPMDWYNH QNSLGYDAQD VYYPAFQTNG TQCVYYATPD
101: NGSVHPSYSP YPMDPGFIVD GSYLPQEYVP DTDPTYQVVP SSYYIPSVLP YALDSVLGIT AASLHPSSVA FIPSMPAYAA TSANHALPSM ALVAPKNDVA
201: VNPPAQSTIV SSKQFQNHSM MPIIQLHNPL PMKQELGNGS MVPVKPLHTL QTSTNVLARP MAAAKHSPKA KLSGNGCFAC VESDPQKWAS AEKFQPTSNS
301: SGQLKAHGSS NAEKHSGHRS PAIVAKSYTS RLVVGNSDGT ILIRPDQYNG NDLRLNNPYA KFFVIKSIGE ADIHKSIKYG VWSSSSSGNS KLDCAYRDAD
401: RIAKRNSTKC PVFLFFSVNG SGHFCGLAEM VGPVDFHKDM DFWCQDKWIG CFPVRWHIIK DVPNYTLQHI LLQNNENKPV THSRDTQEVL YVPGISVLKI
501: LKEIQVKECL FDDFVRYEED EARIKQRRWS KLSHNARDFV PVLQRKSDAL DLQLPKFGGV LIDRTLEIQN MSEKMHDFNG IKQQDAVEKK AGSEAEKENG
601: HQESYCNGKQ DDEKVPRSST SQPQTSTLKT SMDGKQQYWK KVENPKPNPE GAGH

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.