CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11876	Soybean	endoplasmic reticulum	91.44	57.92
KRH26322	Soybean	cytosol	15.09	52.34
KRH02430	Soybean	cytosol	76.8	49.14
KRH50636	Soybean	cytosol	75.45	48.2
VIT_05s0020g00460.t01	Wine grape	cytosol	69.82	43.42
Solyc12g099090.1.1	Tomato	cytosol	60.14	38.7
PGSC0003DMT400011739	Potato	cytosol	60.36	38.34
Bra018708.1-P	Field mustard	nucleus	52.48	38.32
CDX93645	Canola	nucleus	52.03	37.75
AT1G48110.2	Thale cress	nucleus	54.28	37.72
CDY43306	Canola	cytosol	52.03	37.68
AT3G17330.1	Thale cress	nucleus	49.32	36.81
KRH13810	Soybean	nucleus, plastid	38.74	29.81
KRH43645	Soybean	nucleus	38.74	29.71
KRH46969	Soybean	endoplasmic reticulum, extracellular	41.89	28.75
KRH44697	Soybean	mitochondrion	41.89	28.27
GSMUA_Achr8P29890_001	Banana	cytosol	49.32	27.0
Os03t0317000-01	Rice	plasma membrane	43.02	26.94
KRH06073	Soybean	cytosol, nucleus, peroxisome	29.73	26.61
GSMUA_Achr1P24980_001	Banana	nucleus	49.55	26.51
KRH43005	Soybean	nucleus	41.22	25.88
KRH59123	Soybean	nucleus	41.22	25.85
TraesCS4D01G180500.5	Wheat	cytosol, nucleus, plastid	41.44	25.81
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	41.22	25.63
TraesCS4A01G125600.3	Wheat	cytosol, nucleus, plastid	41.22	25.45
KRH70155	Soybean	nucleus	36.04	25.4
KRG94807	Soybean	nucleus	37.16	25.04
KRH06717	Soybean	nucleus	36.26	24.28
HORVU4Hr1G052390.3	Barley	golgi	40.54	24.0
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	35.14	23.85
Os01t0329800-01	Rice	cytosol	36.71	23.02
TraesCS3B01G232300.2	Wheat	cytosol	34.91	22.56
TraesCS3A01G199100.2	Wheat	cytosol	34.91	22.5
TraesCS3D01G199400.2	Wheat	cytosol	34.46	22.24
Zm00001d034996_P005	Maize	cytosol	34.01	21.95
TraesCS1B01G128700.1	Wheat	cytosol	34.01	21.48
TraesCS1D01G109300.1	Wheat	cytosol	34.01	21.39
Zm00001d049729_P008	Maize	cytosol	34.46	21.25
TraesCS1A01G105700.1	Wheat	cytosol	33.56	21.23
Zm00001d010826_P001	Maize	cytosol	19.59	21.01
KXG24185	Sorghum	nucleus	34.46	20.87
OQU77486	Sorghum	cytosol	30.41	19.07

Protein Annotations

EMBL:ACUP02005400	EnsemblPlants:KRH36908	EnsemblPlantsGene:GLYMA_09G031200	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF22
PFAM:PF04146	PFscan:PS50882	ProteinID:KRH36908	ProteinID:KRH36908.1	SEG:seg	UniParc:UPI0006ED4DE9
UniProt:A0A0R0I342	MapMan:16.5.2.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:2565883..2573434

Molecular Weight (calculated)

50014.0 Da

IEP (calculated)

6.588

GRAVY (calculated)

-0.679

Length

444 amino acids

Sequence
(BLAST)

001: MINEGAPEYF CYQNVYYPAA TNYGYYCTGF ETPGEWEDHH RIFGVDGPNI QFMGAQNESL PYVYYNYGYA QSPYNPYNPY IPGAMIGADG SLGGGQHYYT
101: LPNYQSPVSA PGYIPSVQPD NFSDSSADSF FGASASVSKP DGRGLRHKFN SASGNFPRNS SNFLSNQTSS LARVSERPRA YDGSRFLNLA LPAVHRSAAA
201: KLRPKLHNGK VVPNGGNGSS DVLGEQNQGP RVSRSKHQLS VKAYTTMAGD ANEQGNIVIY PDQYNKEDFS LDYENAKFFV IKSYSEDDVH KSIKYNVWSS
301: TPHGNKLENA YEDAKKIAAE KSEVCPIFLF FSVNASGQFC GVAEMVGTVD FNKNMDFWQQ DKWSGSFPLK WHIIKDVPNP NFRHITLENN ENKPVTNSRD
401: TQEIMYWKGL EMLKIFKNNT LKTSLLDDFM YYENRQKIMQ DEKA

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.