Factsheet for Zm00001d049729_P008

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24185	Sorghum	nucleus	88.33	86.77
Zm00001d034996_P005	Maize	cytosol	80.14	83.87
TraesCS3A01G199100.2	Wheat	cytosol	58.61	61.25
TraesCS3D01G199400.2	Wheat	cytosol	58.19	60.9
TraesCS3B01G232300.2	Wheat	cytosol	57.78	60.55
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	53.19	58.56
Os01t0329800-01	Rice	cytosol	55.97	56.92
Zm00001d002008_P001	Maize	cytosol	5.42	53.42
Zm00001d010826_P001	Maize	cytosol	22.36	38.89
KRH36908	Soybean	cytosol	21.25	34.46
Bra018708.1-P	Field mustard	nucleus	23.89	28.29
CDX93645	Canola	nucleus	24.03	28.27
CDY43306	Canola	cytosol	23.75	27.9
AT1G48110.2	Thale cress	nucleus	24.31	27.39
KRH02430	Soybean	cytosol	26.11	27.09
AT3G17330.1	Thale cress	nucleus	22.36	27.06
VIT_05s0020g00460.t01	Wine grape	cytosol	26.67	26.89
KRH50636	Soybean	cytosol	25.56	26.47
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	14.44	26.07
Solyc12g099090.1.1	Tomato	cytosol	24.58	25.65
PGSC0003DMT400011739	Potato	cytosol	24.58	25.32
KRH11876	Soybean	endoplasmic reticulum	24.03	24.68
Zm00001d034005_P003	Maize	plasma membrane	21.81	23.79
Zm00001d011602_P001	Maize	nucleus	19.17	22.66
Zm00001d002372_P002	Maize	nucleus	17.36	22.64
Zm00001d031981_P002	Maize	cytosol	20.42	22.58
Zm00001d024339_P001	Maize	extracellular	18.47	22.47
Zm00001d007890_P002	Maize	mitochondrion	20.14	22.21
Zm00001d049360_P004	Maize	extracellular	18.33	22.15
Zm00001d047072_P001	Maize	mitochondrion	14.72	21.68
Zm00001d018896_P002	Maize	mitochondrion	20.69	21.1
Zm00001d043860_P001	Maize	mitochondrion	18.89	20.15
Zm00001d048424_P003	Maize	plastid	20.56	20.0
Zm00001d038120_P001	Maize	cytosol	6.25	19.31
Zm00001d051781_P001	Maize	cytosol, extracellular	6.67	19.12
Zm00001d027731_P012	Maize	plastid	21.11	18.93
Zm00001d032562_P001	Maize	cytosol	6.81	17.69
Zm00001d048501_P002	Maize	cytosol	16.94	16.09

Protein Annotations

EMBL:BT066758	EMBL:EU957472	EnsemblPlants:Zm00001d049729_P008	EnsemblPlants:Zm00001d049729_T008	EnsemblPlantsGene:Zm00001d049729	EntrezGene:100281658
Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275
InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF26	PFAM:PF04146	PFscan:PS50882	ProteinID:AQK51205.1
ProteinID:AQK51206.1	ProteinID:AQK51208.1	UniParc:UPI000182C7E8	UniProt:B6SXK7	MapMan:16.5.2.1	:

Description

evolutionarily conserved C-terminal region 7

Coordinates

chr4:+:41732031..41736518

Molecular Weight (calculated)

78510.2 Da

IEP (calculated)

7.116

GRAVY (calculated)

-0.526

Length

720 amino acids

Sequence
(BLAST)

001: MEMGMTPEVM YGQNVFVPAT ANPYQYGYTE VGSPMEWYSH PNSSGYASQD IFYSAEGMQC VYYAAPDNGS MHPTYIPYPS DPSFVPDGSF MPQEYVADPA
101: NSTCQIGPSS YYIPAVLPYA QDSVPGSATT PLYSSNVAFL PGIPGYAATS ANAAFPLIAP VTTKSDIVVH PPVQSTIVPL KQLQDHAKPP KVQLHNSVPQ
201: KQELPDRCMV PAKLPHASQV SAHLSGNNCL GCAAGSDLHK WAAAEKFQPS SKSSGHLNGT GQKVHSLVDS EKPSNQSFAM IVKSHTLRLP VGNPDGTIII
301: RTDQYNRDDL RVDYMYAKFF VIKSIGEADV HKSIKYGVWS SSSNGNIKLD SAFRDADRIS RRHSTKCPVF LFFSVNGSGH FCGMAEMVGP VDFHKDMDFW
401: CQDKWTGCFP VRWHIVKDIP NGFLQHITLQ NNENKPVTHS RDTQEIPYLP GISVIKIFKD IKVRDCLFDD FMRYEAEEAQ MKPHRRCKLS YDAPDFVPVS
501: QRTEQTKSSS VLVDRTSEIQ NVSEKPHDAK VINPQEPRAS DKQASEAEKE NELQESHCSG SQNQEDAAKT ATNHPPGPSL KAAGADGKQQ YWKKVENPKQ
601: HADSGAAQGS LKAPEKRLNG VSGSASTVPV PEGGEQQRVT AKLGSLKISS KAVEADRKTS TAGMEKQLNG VSGSGSAVPE GGEEQKVKIS SKVVEADRKT
701: SKAGVVTIGS MPVRVDSYAV

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.