Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d006944_P001 | |
| Zm00001d022272_P002 | |
| Zm00001d024762_P001 | |
| Zm00001d040567_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34475 | Sorghum | cytosol | 86.83 | 87.77 |
| Zm00001d018896_P002 | Maize | mitochondrion | 86.83 | 80.31 |
| Zm00001d002008_P001 | Maize | cytosol | 8.12 | 72.6 |
| Os07t0170300-01 | Rice | plasma membrane | 62.02 | 67.28 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 48.85 | 54.16 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 48.55 | 53.91 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 49.16 | 53.86 |
| CDY57677 | Canola | mitochondrion | 13.32 | 50.88 |
| HORVU5Hr1G104380.1 | Barley | plastid | 49.77 | 49.17 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 47.01 | 47.82 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 46.86 | 47.66 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 47.01 | 47.38 |
| HORVU5Hr1G104390.3 | Barley | plastid | 46.55 | 44.19 |
| Bra004105.1-P | Field mustard | nucleus | 26.34 | 43.43 |
| CDY07437 | Canola | nucleus | 27.11 | 42.04 |
| CDY50448 | Canola | cytosol | 16.39 | 41.96 |
| Bra008509.1-P | Field mustard | cytosol | 26.95 | 41.61 |
| CDY39299 | Canola | nucleus | 26.95 | 41.61 |
| CDY50867 | Canola | nucleus | 24.81 | 40.5 |
| CDY42891 | Canola | nucleus | 24.81 | 40.5 |
| CDX91541 | Canola | mitochondrion | 10.11 | 40.49 |
| Bra031960.1-P | Field mustard | nucleus | 24.5 | 40.4 |
| CDY69959 | Canola | nucleus | 24.5 | 40.1 |
| CDY56132 | Canola | nucleus | 27.41 | 40.04 |
| CDY52966 | Canola | cytosol | 27.41 | 39.96 |
| AT3G03950.3 | Thale cress | cytosol | 26.19 | 39.95 |
| CDY21154 | Canola | nucleus | 24.81 | 39.8 |
| CDY29972 | Canola | nucleus | 24.96 | 39.76 |
| Bra036423.1-P | Field mustard | nucleus | 24.5 | 39.41 |
| AT1G55500.5 | Thale cress | cytosol | 35.68 | 38.51 |
| CDY23602 | Canola | nucleus | 36.6 | 38.3 |
| CDY43989 | Canola | nucleus | 37.06 | 38.17 |
| Bra027432.1-P | Field mustard | nucleus | 36.91 | 38.01 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 40.28 | 37.9 |
| VIT_06s0004g00200.t01 | Wine grape | nucleus | 40.74 | 37.73 |
| Bra001506.1-P | Field mustard | nucleus | 36.6 | 37.4 |
| CDX82538 | Canola | nucleus | 36.45 | 37.19 |
| CDX75712 | Canola | nucleus | 35.99 | 37.07 |
| AT5G61020.1 | Thale cress | cytosol | 28.02 | 36.97 |
| CDY24182 | Canola | nucleus | 30.63 | 36.97 |
| AT3G13460.1 | Thale cress | cytosol | 37.52 | 36.73 |
| CDY07089 | Canola | nucleus | 35.68 | 36.64 |
| Bra039400.1-P | Field mustard | nucleus | 35.38 | 36.32 |
| Zm00001d034005_P003 | Maize | plasma membrane | 36.29 | 35.91 |
| Bra038524.1-P | Field mustard | cytosol | 12.25 | 35.56 |
| KRH59123 | Soybean | nucleus | 38.44 | 35.45 |
| KRH43005 | Soybean | nucleus | 38.13 | 35.22 |
| Solyc01g028860.2.1 | Tomato | nucleus | 37.98 | 35.13 |
| Bra018951.1-P | Field mustard | cytosol | 13.78 | 34.75 |
| Bra014253.1-P | Field mustard | cytosol | 15.62 | 34.23 |
| KRG94807 | Soybean | nucleus | 34.3 | 33.99 |
| PGSC0003DMT400061684 | Potato | endoplasmic reticulum, plasma membrane | 37.98 | 33.7 |
| KRH06717 | Soybean | nucleus | 34.15 | 33.63 |
| KRH70155 | Soybean | nucleus | 31.55 | 32.7 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 19.6 | 32.08 |
| Zm00001d048424_P003 | Maize | plastid | 36.14 | 31.89 |
| Zm00001d027731_P012 | Maize | plastid | 37.06 | 30.14 |
| Zm00001d031981_P002 | Maize | cytosol | 29.25 | 29.34 |
| Zm00001d024339_P001 | Maize | extracellular | 26.34 | 29.05 |
| Zm00001d002372_P002 | Maize | nucleus | 24.5 | 28.99 |
| Zm00001d047072_P001 | Maize | mitochondrion | 21.44 | 28.63 |
| Zm00001d049360_P004 | Maize | extracellular | 25.73 | 28.19 |
| Zm00001d011602_P001 | Maize | nucleus | 25.88 | 27.75 |
| Zm00001d043860_P001 | Maize | mitochondrion | 26.49 | 25.63 |
| Zm00001d038120_P001 | Maize | cytosol | 8.73 | 24.46 |
| Zm00001d032562_P001 | Maize | cytosol | 9.19 | 21.66 |
| Zm00001d051781_P001 | Maize | cytosol, extracellular | 8.12 | 21.12 |
| Zm00001d010826_P001 | Maize | cytosol | 13.17 | 20.77 |
| Zm00001d048501_P002 | Maize | cytosol | 23.74 | 20.45 |
| Zm00001d049729_P008 | Maize | cytosol | 22.21 | 20.14 |
| Zm00001d034996_P005 | Maize | cytosol | 20.98 | 19.91 |
Protein Annotations
| EnsemblPlants:Zm00001d007890_P002 | EnsemblPlants:Zm00001d007890_T002 | EnsemblPlantsGene:Zm00001d007890 | EntrezGene:100285206 | Gene3D:3.10.590.10 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 |
| PANTHER:PTHR12357:SF34 | PFAM:PF04146 | PFscan:PS50882 | ProteinID:ONM27827.1 | SEG:seg | UniParc:UPI0008423625 |
| UniProt:A0A1D6F9L1 | MapMan:16.5.2.1 | : | : | : | : |
Description
YT521-B-like family protein
Coordinates
chr2:+:241881184..241885273
Molecular Weight (calculated)
72129.6 Da
IEP (calculated)
7.723
GRAVY (calculated)
-0.725
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFRSFQAPA KGVMAAVGSL QPGVETLHVQ DYKDAPPAKA VAAAVESLQP AMESLHVQEF KDAAPAKGVS AAAVGSLQPG MENLQVQDYK DASMYYGAYP
101: AYPYGAPYGG WGEYSTYLSH DGAQTPTAGA YADMYYGHAA YGHIYGSQNY QYPSTYSKQQ NSTAKLSSNG KSEKLAPAPE GDVSTIVVDE VKVLKNPNPT
201: LKADRNAPGS NGSYGRSSVR SGNYQNQTSW SHYPYYSSEM FSDKQQKFTS NHNSTAPNDK TKGQSRNQNT RQYPHLMIFF FKGLQTPTSP SVYSANGIYR
301: YDGSYGPSLW YGSHMYSSGL YGGWNSLYDG KYRTRGRCNN GYYAYGNGSL DGFNELKRGP RSGMYTNQLG LGATTEVPAK EQDLLSANGS HPAMKDQYNR
401: ADFAETYSDA KFFIIKSYSE DDVHKSVKYN VWASTPNGNK KLDAAYQEAK EKSSETPVFL LFSVNASGQF VGLAEMVGRV DFNKTVDHWQ QDKWTGCFPV
501: KWHIVKDVPN SLLKHIILEN NENKPVTNSR DTHEVKLEQG LQVLKVFKDH VCKTSILDDF GFYDNREKMM QYRKAKQQQS LKKVIDVKVP NATDADTSLV
601: GTGSTELTNV EADVLNKELS LDKAVEKNEE KGNDVAPQDL KSSAEKSASP NGC
101: AYPYGAPYGG WGEYSTYLSH DGAQTPTAGA YADMYYGHAA YGHIYGSQNY QYPSTYSKQQ NSTAKLSSNG KSEKLAPAPE GDVSTIVVDE VKVLKNPNPT
201: LKADRNAPGS NGSYGRSSVR SGNYQNQTSW SHYPYYSSEM FSDKQQKFTS NHNSTAPNDK TKGQSRNQNT RQYPHLMIFF FKGLQTPTSP SVYSANGIYR
301: YDGSYGPSLW YGSHMYSSGL YGGWNSLYDG KYRTRGRCNN GYYAYGNGSL DGFNELKRGP RSGMYTNQLG LGATTEVPAK EQDLLSANGS HPAMKDQYNR
401: ADFAETYSDA KFFIIKSYSE DDVHKSVKYN VWASTPNGNK KLDAAYQEAK EKSSETPVFL LFSVNASGQF VGLAEMVGRV DFNKTVDHWQ QDKWTGCFPV
501: KWHIVKDVPN SLLKHIILEN NENKPVTNSR DTHEVKLEQG LQVLKVFKDH VCKTSILDDF GFYDNREKMM QYRKAKQQQS LKKVIDVKVP NATDADTSLV
601: GTGSTELTNV EADVLNKELS LDKAVEKNEE KGNDVAPQDL KSSAEKSASP NGC
001: MATVAPPADQ ATDLLQKLSL DSPAKASEIP EPNKKTAVYQ YGGVDVHGQV PSYDRSLTPM LPSDAADPSV CYVPNPYNPY QYYNVYGSGQ EWTDYPAYTN
101: PEGVDMNSGI YGENGTVVYP QGYGYAAYPY SPATSPAPQL GGEGQLYGAQ QYQYPNYFPN SGPYASSVAT PTQPDLSANK PAGVKTLPAD SNNVASAAGI
201: TKGSNGSAPV KPTNQATLNT SSNLYGMGAP GGGLAAGYQD PRYAYEGYYA PVPWHDGSKY SDVQRPVSGS GVASSYSKSS TVPSSRNQNY RSNSHYTSVH
301: QPSSVTGYGT AQGYYNRMYQ NKLYGQYGST GRSALGYGSS GYDSRTNGRG WAATDNKYRS WGRGNSYYYG NENNVDGLNE LNRGPRAKGT KNQKGNLDDS
401: LEVKEQTGES NVTEVGEADN TCVVPDREQY NKEDFPVDYA NAMFFIIKSY SEDDVHKSIK YNVWASTPNG NKKLAAAYQE AQQKAGGCPI FLFFSVNASG
501: QFVGLAEMTG PVDFNTNVEY WQQDKWTGSF PLKWHIVKDV PNSLLKHITL ENNENKPVTN SRDTQEVKLE QGLKIVKIFK EHSSKTCILD DFSFYEVRQK
601: TILEKKAKQT QKQVSEEKVT DEKKESATAE SASKESPAAV QTSSDVKVAE NGSVAKPVTG DVVANGC
101: PEGVDMNSGI YGENGTVVYP QGYGYAAYPY SPATSPAPQL GGEGQLYGAQ QYQYPNYFPN SGPYASSVAT PTQPDLSANK PAGVKTLPAD SNNVASAAGI
201: TKGSNGSAPV KPTNQATLNT SSNLYGMGAP GGGLAAGYQD PRYAYEGYYA PVPWHDGSKY SDVQRPVSGS GVASSYSKSS TVPSSRNQNY RSNSHYTSVH
301: QPSSVTGYGT AQGYYNRMYQ NKLYGQYGST GRSALGYGSS GYDSRTNGRG WAATDNKYRS WGRGNSYYYG NENNVDGLNE LNRGPRAKGT KNQKGNLDDS
401: LEVKEQTGES NVTEVGEADN TCVVPDREQY NKEDFPVDYA NAMFFIIKSY SEDDVHKSIK YNVWASTPNG NKKLAAAYQE AQQKAGGCPI FLFFSVNASG
501: QFVGLAEMTG PVDFNTNVEY WQQDKWTGSF PLKWHIVKDV PNSLLKHITL ENNENKPVTN SRDTQEVKLE QGLKIVKIFK EHSSKTCILD DFSFYEVRQK
601: TILEKKAKQT QKQVSEEKVT DEKKESATAE SASKESPAAV QTSSDVKVAE NGSVAKPVTG DVVANGC
Arabidopsis Description
ECT2ECT2 [Source:UniProtKB/TrEMBL;Acc:A0A178VBC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.