Factsheet for Bra004105.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39299	Canola	nucleus	97.47	91.25
Bra008509.1-P	Field mustard	cytosol	76.77	71.87
AT5G61020.1	Thale cress	cytosol	66.92	53.54
Bra018951.1-P	Field mustard	cytosol	34.09	52.12
Bra038524.1-P	Field mustard	cytosol	29.29	51.56
Bra014253.1-P	Field mustard	cytosol	37.63	50.0
Bra031960.1-P	Field mustard	nucleus	40.15	40.15
Bra036423.1-P	Field mustard	nucleus	40.66	39.66
GSMUA_Achr4P14820_001	Banana	cytosol	27.27	32.63
Bra027432.1-P	Field mustard	nucleus	51.26	32.02
Bra001506.1-P	Field mustard	nucleus	50.76	31.46
Bra039400.1-P	Field mustard	nucleus	49.49	30.82
EER93313	Sorghum	cytosol	44.19	30.59
GSMUA_Achr7P01490_001	Banana	nucleus	42.93	30.36
TraesCS5A01G431200.1	Wheat	nucleus	44.44	29.88
TraesCS5D01G439100.1	Wheat	nucleus	43.69	29.42
VIT_08s0007g07450.t01	Wine grape	cytosol	51.52	29.39
Bra035104.1-P	Field mustard	cytosol	32.83	29.35
Os07t0170300-01	Rice	plasma membrane	44.19	29.07
Bra008406.1-P	Field mustard	cytosol	32.83	29.02
TraesCS5B01G433000.1	Wheat	cytosol	43.43	28.86
GSMUA_Achr4P22630_001	Banana	nucleus	44.7	28.5
TraesCS5A01G431100.1	Wheat	cytosol	45.96	28.35
TraesCS5D01G439200.1	Wheat	cytosol	45.96	28.35
GSMUA_Achr5P02830_001	Banana	cytosol	43.69	28.08
KXG34475	Sorghum	cytosol	45.71	28.02
GSMUA_Achr4P21380_001	Banana	nucleus	46.46	27.96
KRH70155	Soybean	nucleus	44.44	27.94
TraesCS5B01G432900.2	Wheat	extracellular	45.71	27.93
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	43.18	27.8
EER93461	Sorghum	nucleus	46.21	27.77
TraesCS5A01G386600.2	Wheat	nucleus	46.21	27.6
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	46.21	27.52
TraesCS5D01G396400.3	Wheat	nucleus	45.96	27.49
TraesCS5B01G391500.1	Wheat	nucleus	45.96	27.49
Zm00001d034005_P003	Maize	plasma membrane	45.71	27.42
Os03t0748000-01	Rice	plasma membrane	45.45	27.23
Bra003615.1-P	Field mustard	nucleus	34.85	27.11
Bra034710.1-P	Field mustard	nucleus	40.15	26.77
KRG94807	Soybean	nucleus	44.44	26.71
KRH06717	Soybean	nucleus	44.44	26.55
HORVU5Hr1G104380.1	Barley	plastid	44.19	26.48
GSMUA_Achr7P27220_001	Banana	cytosol	44.19	26.48
Bra039366.1-P	Field mustard	nucleus	40.15	26.46
Zm00001d007890_P002	Maize	mitochondrion	43.43	26.34
Os03t0158500-01	Rice	nucleus	46.72	26.17
HORVU5Hr1G104390.3	Barley	plastid	45.45	26.16
KXG40139	Sorghum	plastid	45.96	25.6
Bra010911.1-P	Field mustard	nucleus	33.59	25.53
Bra006780.1-P	Field mustard	cytosol	32.58	25.34
Zm00001d018896_P002	Maize	mitochondrion	44.44	24.93
TraesCS4D01G273200.4	Wheat	cytosol	45.45	24.9
Bra019988.1-P	Field mustard	nucleus	31.31	24.75
TraesCS4A01G031600.2	Wheat	cytosol	45.2	24.55
Zm00001d048424_P003	Maize	plastid	45.71	24.46
HORVU4Hr1G072940.4	Barley	cytosol	45.2	24.12
Bra020382.1-P	Field mustard	nucleus	32.58	23.33
TraesCS4B01G274500.2	Wheat	plastid	44.7	23.08
Zm00001d027731_P012	Maize	plastid	46.21	22.79
Bra018708.1-P	Field mustard	nucleus	32.07	20.89

Protein Annotations

EnsemblPlants:Bra004105.1	EnsemblPlants:Bra004105.1-P	EnsemblPlantsGene:Bra004105	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI00025413FF	UniProt:M4CIS1	MapMan:16.5.2.1

Description

AT5G61020 (E=6e-088) ECT3 | ECT3

Coordinates

chrA07:+:16871271..16872870

Molecular Weight (calculated)

45075.3 Da

IEP (calculated)

8.736

GRAVY (calculated)

-0.938

Length

396 amino acids

Sequence
(BLAST)

001: MAKVTDNTGN NKQDVYGGNS NNGFSTKKKL GYNNYSAQKG SYGSYYYPQA YQYPRYGYDM TYPSGKTTNN TPYLGRSGGG YMDSMYSMYG PYSYMSGYGY
101: DTYGYGTYKY TPNWYSFNNG YKTKGYGLYG KENAEWLNEL NRGPRAKGFK SGQPETLKDV SVPDSKEYNK EDFSDSYYSN AKLFVIKSYS EDDVHKSIKY
201: NVWSSTPNGN KKLNAAYNEA KDKSCPVFLI FSVNTSGQFV GLAEMVGPVD FNQTVEYWQQ DKWVGCFPVK WHIVKDIPNS SLRHITLENN ENKPVTNSRD
301: TQEVKIEQGV KVIKIFKEHE SKTCILDDFV FYESREKIIK EGKKKHQEYK KQALAASDKK ATPKEEPKET KETSSMIPEV VEEISQNGVA EVASAC

Best Arabidopsis Sequence Match ( AT5G61020.1 )
(BLAST)

001: MANPDHVSDV LHNLSIDPTT KALAPDSETK LQGAYGGNGN DFLLNDELVE ATKIGKPSLL SKDGGVTKDK GSNLKKLGYQ SAAYNAKGSY GKGAYAYGYY
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC

Arabidopsis Description

ECT3ECT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.