Factsheet for Bra038524.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018951.1-P	Field mustard	cytosol	84.89	73.75
CDY57677	Canola	mitochondrion	54.22	71.34
CDX91541	Canola	mitochondrion	47.11	65.03
Bra014253.1-P	Field mustard	cytosol	84.44	63.76
Bra004105.1-P	Field mustard	nucleus	51.56	29.29
Bra008509.1-P	Field mustard	cytosol	48.0	25.53
AT5G61020.1	Thale cress	cytosol	43.56	19.8
Bra036423.1-P	Field mustard	nucleus	29.33	16.26
Bra031960.1-P	Field mustard	nucleus	28.0	15.91
Bra008406.1-P	Field mustard	cytosol	30.67	15.4
Bra035104.1-P	Field mustard	cytosol	29.33	14.9
GSMUA_Achr4P14820_001	Banana	cytosol	20.89	14.2
Bra001506.1-P	Field mustard	nucleus	39.56	13.93
Bra027432.1-P	Field mustard	nucleus	39.11	13.88
Bra039400.1-P	Field mustard	nucleus	39.11	13.84
EER93313	Sorghum	cytosol	34.22	13.46
Bra003615.1-P	Field mustard	nucleus	30.22	13.36
Os07t0170300-01	Rice	plasma membrane	34.67	12.96
TraesCS5A01G431200.1	Wheat	nucleus	33.78	12.9
GSMUA_Achr7P01490_001	Banana	nucleus	32.0	12.86
VIT_08s0007g07450.t01	Wine grape	cytosol	39.56	12.82
Bra034710.1-P	Field mustard	nucleus	33.33	12.63
EER93461	Sorghum	nucleus	36.89	12.59
KXG34475	Sorghum	cytosol	36.0	12.54
Bra039366.1-P	Field mustard	nucleus	33.33	12.48
Bra010911.1-P	Field mustard	nucleus	28.89	12.48
Zm00001d034005_P003	Maize	plasma membrane	36.44	12.42
TraesCS5D01G439100.1	Wheat	nucleus	32.44	12.41
TraesCS5B01G391500.1	Wheat	nucleus	36.44	12.39
TraesCS5D01G396400.3	Wheat	nucleus	36.44	12.39
TraesCS5A01G386600.2	Wheat	nucleus	36.44	12.37
GSMUA_Achr4P21380_001	Banana	nucleus	36.0	12.31
TraesCS5D01G439200.1	Wheat	cytosol	35.11	12.31
TraesCS5A01G431100.1	Wheat	cytosol	35.11	12.31
Zm00001d007890_P002	Maize	mitochondrion	35.56	12.25
TraesCS5B01G432900.2	Wheat	extracellular	35.11	12.19
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	36.0	12.18
GSMUA_Achr5P02830_001	Banana	cytosol	33.33	12.18
GSMUA_Achr4P22630_001	Banana	nucleus	33.33	12.08
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	32.89	12.03
TraesCS5B01G433000.1	Wheat	cytosol	31.56	11.91
Os03t0748000-01	Rice	plasma membrane	34.67	11.8
Bra019988.1-P	Field mustard	nucleus	26.22	11.78
Os03t0158500-01	Rice	nucleus	36.89	11.74
GSMUA_Achr7P27220_001	Banana	cytosol	34.22	11.65
HORVU5Hr1G104380.1	Barley	plastid	33.78	11.5
Bra006780.1-P	Field mustard	cytosol	25.78	11.39
Zm00001d018896_P002	Maize	mitochondrion	35.56	11.33
KRH70155	Soybean	nucleus	31.56	11.27
KXG40139	Sorghum	plastid	35.56	11.25
HORVU5Hr1G104390.3	Barley	plastid	34.22	11.19
Zm00001d048424_P003	Maize	plastid	36.0	10.95
TraesCS4D01G273200.4	Wheat	cytosol	35.11	10.93
TraesCS4A01G031600.2	Wheat	cytosol	35.11	10.84
HORVU4Hr1G072940.4	Barley	cytosol	35.11	10.65
KRG94807	Soybean	nucleus	31.11	10.62
TraesCS4B01G274500.2	Wheat	plastid	35.56	10.43
KRH06717	Soybean	nucleus	30.67	10.41
Bra020382.1-P	Field mustard	nucleus	24.89	10.13
Zm00001d027731_P012	Maize	plastid	35.11	9.84
Bra018708.1-P	Field mustard	nucleus	26.22	9.7

Protein Annotations

Gene3D:1.10.287.110	MapMan:16.5.2.1	Gene3D:3.10.590.10	EnsemblPlantsGene:Bra038524	EnsemblPlants:Bra038524.1	EnsemblPlants:Bra038524.1-P
InterPro:DnaJ_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR001623
InterPro:IPR007275	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4FBQ8	PFAM:PF04146	PRINTS:PR00625
PFscan:PS50882	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56	SUPFAM:SSF46565	UniParc:UPI0002541F50	InterPro:YTH_domain
SEG:seg	:	:	:	:	:

Description

AT5G61020 (E=6e-024) ECT3 | ECT3

Coordinates

chrA09:-:5088335..5089904

Molecular Weight (calculated)

24562.8 Da

IEP (calculated)

5.395

GRAVY (calculated)

-0.473

Length

225 amino acids

Sequence
(BLAST)

001: MKLRFTSTSS SSPIEEKRNR IFKELAQTYE VLSEAEMREI YDLYGEDALK EGMGGGGGGH DPFDIFSSFF GGGSGHPFGA AVERGRGVVK MLFTLGSTSN
101: GNKKLNAAYN EAAGDKSSCP VFLIFSMAEC WQQDKWVGCF PVKCHIVKDI PNCSLRHITL ENDENKPVTN SHDTQEVKIE QGVKQSFTAS DKKATPKDKS
201: KETSVIAEVA EEISQNSVAE VASTC

Best Arabidopsis Sequence Match ( AT5G61020.1 )
(BLAST)

001: MANPDHVSDV LHNLSIDPTT KALAPDSETK LQGAYGGNGN DFLLNDELVE ATKIGKPSLL SKDGGVTKDK GSNLKKLGYQ SAAYNAKGSY GKGAYAYGYY
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC

Arabidopsis Description

ECT3ECT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.