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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • nucleus 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plasma membrane, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d006944_P001
Zm00001d022272_P002
Zm00001d024762_P001
Zm00001d040567_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G13460.1 Zm00001d006944_P001 AT3G17510.1 16113215
AT3G13460.1 Zm00001d022272_P002 AT3G17510.1 16113215
AT3G13460.1 Zm00001d024762_P001 AT3G17510.1 16113215
AT3G13460.1 Zm00001d040567_P001 AT3G17510.1 16113215
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG40139 Sorghum plastid 83.65 87.06
Os03t0158500-01 Rice nucleus 74.19 77.65
Zm00001d027731_P012 Maize plastid 80.54 74.22
Zm00001d002008_P001 Maize cytosol 7.16 72.6
TraesCS4D01G273200.4 Wheat cytosol 66.62 68.19
HORVU4Hr1G072940.4 Barley cytosol 67.84 67.66
TraesCS4A01G031600.2 Wheat cytosol 66.35 67.35
TraesCS4B01G274500.2 Wheat plastid 69.73 67.28
CDY57677 Canola mitochondrion 11.62 50.29
Zm00001d034005_P003 Maize plasma membrane 44.59 50.0
VIT_06s0004g00200.t01 Wine grape nucleus 46.22 48.51
GSMUA_Achr7P27220_001 Banana cytosol 42.84 47.96
GSMUA_Achr4P14820_001 Banana cytosol 21.35 47.73
KRH43005 Soybean nucleus 45.41 47.52
AT1G55500.5 Thale cress cytosol 38.78 47.44
Solyc01g028860.2.1 Tomato nucleus 45.0 47.17
CDY23602 Canola nucleus 39.59 46.96
CDY43989 Canola nucleus 39.86 46.53
KRH59123 Soybean nucleus 44.32 46.33
CDY50448 Canola cytosol 15.95 46.27
VIT_08s0007g07450.t01 Wine grape cytosol 43.38 46.25
Bra027432.1-P Field mustard nucleus 39.59 46.21
AT3G13460.1 Thale cress cytosol 41.49 46.03
Bra004105.1-P Field mustard nucleus 24.46 45.71
CDY07437 Canola nucleus 25.95 45.61
Bra001506.1-P Field mustard nucleus 39.05 45.23
CDX82538 Canola nucleus 39.05 45.16
CDY39299 Canola nucleus 25.81 45.15
CDX75712 Canola nucleus 38.65 45.11
PGSC0003DMT400061684 Potato endoplasmic reticulum, plasma membrane 44.86 45.11
Bra039400.1-P Field mustard nucleus 38.65 44.97
Bra008509.1-P Field mustard cytosol 25.41 44.44
CDY07089 Canola nucleus 38.11 44.34
CDX91541 Canola mitochondrion 9.73 44.17
CDY24182 Canola nucleus 32.16 43.99
CDY21154 Canola nucleus 24.19 43.98
CDY69959 Canola nucleus 23.65 43.86
CDY56132 Canola nucleus 26.49 43.85
Bra036423.1-P Field mustard nucleus 24.05 43.84
CDY52966 Canola cytosol 26.49 43.75
CDY50867 Canola nucleus 23.65 43.75
CDY42891 Canola nucleus 23.65 43.75
Bra031960.1-P Field mustard nucleus 23.24 43.43
CDY29972 Canola nucleus 23.92 43.17
AT3G03950.3 Thale cress cytosol 24.59 42.52
AT5G61020.1 Thale cress cytosol 27.16 40.61
KRG94807 Soybean nucleus 34.86 39.15
KRH06717 Soybean nucleus 34.05 38.01
KRH70155 Soybean nucleus 31.62 37.14
Zm00001d007890_P002 Maize mitochondrion 31.89 36.14
Bra038524.1-P Field mustard cytosol 10.95 36.0
Bra018951.1-P Field mustard cytosol 12.57 35.91
Bra014253.1-P Field mustard cytosol 14.19 35.23
Zm00001d018896_P002 Maize mitochondrion 32.97 34.56
Zm00001d024339_P001 Maize extracellular 26.62 33.28
Zm00001d008913_P001 Maize cytosol, nucleus, peroxisome 17.84 33.08
Zm00001d002372_P002 Maize nucleus 24.46 32.79
Zm00001d049360_P004 Maize extracellular 25.81 32.05
Zm00001d011602_P001 Maize nucleus 25.81 31.36
Zm00001d031981_P002 Maize cytosol 27.57 31.34
Zm00001d038120_P001 Maize cytosol 9.32 29.61
Zm00001d047072_P001 Maize mitochondrion 19.46 29.45
Zm00001d043860_P001 Maize mitochondrion 25.68 28.15
Zm00001d032562_P001 Maize cytosol 10.14 27.08
Zm00001d051781_P001 Maize cytosol, extracellular 8.51 25.1
Zm00001d048501_P002 Maize cytosol 22.43 21.9
Zm00001d034996_P005 Maize cytosol 19.73 21.22
Zm00001d010826_P001 Maize cytosol 11.62 20.77
Zm00001d049729_P008 Maize cytosol 20.0 20.56
Protein Annotations
EnsemblPlants:Zm00001d048424_P003EnsemblPlants:Zm00001d048424_T003EnsemblPlantsGene:Zm00001d048424EntrezGene:100383150Gene3D:3.10.590.10GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0005488InterPro:IPR007275InterPro:YTH_domainPANTHER:PTHR12357
PANTHER:PTHR12357:SF30PFAM:PF04146PFscan:PS50882ProteinID:AQL09674.1SEG:segUniParc:UPI0008454629
UniProt:A0A1D6PK72MapMan:16.5.2.1::::
Description
evolutionarily conserved C-terminal region 2
Coordinates
chr9:-:155994047..155998622
Molecular Weight (calculated)
80142.0 Da
IEP (calculated)
7.438
GRAVY (calculated)
-0.576
Length
740 amino acids
Sequence
(BLAST)
001: MAAVATPPAP APAAPAPAPA PAAAPAPVTV APAADRILSE LLPNHGSAAE VVAGFAAQGG GCDRACCCCR QGQKFSWLPI LSMDHGLIEM ICDSDSFACC
101: LNQEGAVTSQ PLSVAIPPER SITPVLQDFM DPNLFYLPAY YYGGYDSSMS EWDDYPRYLN SDGVEIAPAV YGDIYGYGYA PYGAYSPATS PVPTVDGQMF
201: GAQHYQYPTT YFQPPTPIPS TTQSNLQSSN NPEKPAAKAD PAKATANGVP NGTGHTHSYS GTVPSQQSSA LTPDGTYRAP LLGGVPSAGY LDTTYYGYDS
301: TGAQFAWYDG SAYANGQQRT TTTNRFPSSS FSGNGSSAIY QNKSSTTQQM GMQNRRPTTT SAAPTYPNRM YPSPRPYTQY GNSVKTGLPY GSNGYDSRIY
401: GRCGLGNGMD NRYRPRACSG YYGYGNESQD GTIELNRGPR SGRFKNQKLY GHTVTIAVKG QSLPSSESKN DSAVPDRAKY NRDDFPVQYD AAKFFVIKSY
501: SEDDIHKSVK YNVWASTTNG NKKLDAAYQE AQSKGSACPI FLFFSVNTSG QFVGVAEMTG AVDFEKTLEY WQQDKWNGSF SVKWHIVKDV PNNILKHIIL
601: ENNENKPVTN SRDTQEIRLE QGLQMLKIFK DHVSKTSILD DFAFYESRQK LMQDKRSKQQ QLQKQVWDTR TPVSVTGERP QEPANGKPNP SVPDGVTAEV
701: KAVKAPAENG ITAPVVSYAA KVAQTAPEKP VLSNGVAKTG
Best Arabidopsis Sequence Match ( AT1G55500.5 )
(BLAST)
001: MSTVAPPADQ AADVLKKLSL DSKSRTLEIP EPTKKTGVYQ YGAMDSNGQV PSFDRSLSPM LPSDALDPSV FYVPNVYQQP YYYGYGSDYT GYTNSESVDM
101: TSGAYGENAS LVYPQGYGYA AFPYSPATSP APQLGGDGQL YGAQQYQYPF PLTASSGPFA SSVPASTQSK LSTNKAANSA SAGIPKGMNG SAPVKPLNQS
201: ALYGNSALGG GLAAGYQDPR YSYDGFYTPV SWHDGSNFSD VQRSVSGSGV ASSYSKANNN VPATRNQNSS SNSHYTSMYQ PASMTGYAAQ GYYDRVSPNK
301: SYGQYGSTVR SGMGYGSSGY GSRTNERGWL NTDNKYRSRG RGNSYFYGNE NIDGLNELNR GPRAKGTKAT EEVSSEEVKK QTFDESNTEE TVTCVLPDRE
401: ECNRDDFPVE YKDAKFFIIK SYSEDDVHKS IKYNVWASTP NGNKKLDAAY QEAQQKSSGC PVFLFFSVNA SGQFIGLAEM KGPVDFNKNI EYWQQDKWTG
501: SFPLKWHILK DVPNSLLKHI TLEYNENKPV TNSRDTQEVK LEQGLKVVKI FKEHNSKTCI LDDFSFYEAR QKTILEKKAK QQQSQKQVWE GKTNDEKPGT
601: VDSTM
Arabidopsis Description
ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.