Factsheet for Bra031960.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69959	Canola	nucleus	95.45	94.74
CDY50867	Canola	nucleus	89.14	88.25
CDY42891	Canola	nucleus	89.14	88.25
Bra036423.1-P	Field mustard	nucleus	81.31	79.31
AT3G03950.3	Thale cress	cytosol	80.3	74.3
Bra004105.1-P	Field mustard	nucleus	40.15	40.15
Bra008509.1-P	Field mustard	cytosol	39.65	37.12
GSMUA_Achr4P14820_001	Banana	cytosol	27.27	32.63
GSMUA_Achr7P01490_001	Banana	nucleus	44.7	31.61
Bra027432.1-P	Field mustard	nucleus	48.74	30.44
Bra001506.1-P	Field mustard	nucleus	47.98	29.73
Bra018951.1-P	Field mustard	cytosol	19.19	29.34
Bra014253.1-P	Field mustard	cytosol	21.97	29.19
Bra008406.1-P	Field mustard	cytosol	32.83	29.02
GSMUA_Achr4P22630_001	Banana	nucleus	45.45	28.99
Bra035104.1-P	Field mustard	cytosol	32.32	28.89
GSMUA_Achr5P02830_001	Banana	cytosol	44.7	28.73
GSMUA_Achr4P21380_001	Banana	nucleus	46.97	28.27
EER93313	Sorghum	cytosol	40.66	28.15
Bra039400.1-P	Field mustard	nucleus	45.2	28.14
EER93461	Sorghum	nucleus	46.72	28.07
Bra038524.1-P	Field mustard	cytosol	15.91	28.0
Os03t0748000-01	Rice	plasma membrane	46.46	27.84
Zm00001d034005_P003	Maize	plasma membrane	45.96	27.58
VIT_08s0007g07450.t01	Wine grape	cytosol	48.23	27.52
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	42.17	27.15
GSMUA_Achr7P27220_001	Banana	cytosol	44.95	26.93
Os07t0170300-01	Rice	plasma membrane	40.91	26.91
TraesCS5D01G396400.3	Wheat	nucleus	44.95	26.89
TraesCS5B01G391500.1	Wheat	nucleus	44.7	26.74
TraesCS5D01G439100.1	Wheat	nucleus	39.65	26.7
TraesCS5A01G386600.2	Wheat	nucleus	44.7	26.7
KRH70155	Soybean	nucleus	42.42	26.67
TraesCS5A01G431200.1	Wheat	nucleus	39.65	26.66
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	44.44	26.47
TraesCS5B01G433000.1	Wheat	cytosol	39.65	26.34
Bra003615.1-P	Field mustard	nucleus	33.59	26.13
Bra010911.1-P	Field mustard	nucleus	33.84	25.72
KRG94807	Soybean	nucleus	42.42	25.49
KXG34475	Sorghum	cytosol	41.16	25.23
KXG40139	Sorghum	plastid	45.2	25.18
Bra019988.1-P	Field mustard	nucleus	31.82	25.15
Bra034710.1-P	Field mustard	nucleus	37.63	25.08
Os03t0158500-01	Rice	nucleus	44.44	24.89
KRH06717	Soybean	nucleus	41.67	24.89
TraesCS5A01G431100.1	Wheat	cytosol	40.15	24.77
Bra006780.1-P	Field mustard	cytosol	31.82	24.75
Bra039366.1-P	Field mustard	nucleus	37.37	24.63
TraesCS5D01G439200.1	Wheat	cytosol	39.9	24.61
Zm00001d007890_P002	Maize	mitochondrion	40.4	24.5
TraesCS5B01G432900.2	Wheat	extracellular	39.9	24.38
HORVU5Hr1G104380.1	Barley	plastid	40.4	24.21
Bra020382.1-P	Field mustard	nucleus	33.08	23.69
TraesCS4D01G273200.4	Wheat	cytosol	42.68	23.37
TraesCS4A01G031600.2	Wheat	cytosol	42.93	23.32
Zm00001d048424_P003	Maize	plastid	43.43	23.24
HORVU4Hr1G072940.4	Barley	cytosol	43.43	23.18
Zm00001d018896_P002	Maize	mitochondrion	41.16	23.09
TraesCS4B01G274500.2	Wheat	plastid	43.94	22.69
HORVU5Hr1G104390.3	Barley	plastid	38.89	22.38
Zm00001d027731_P012	Maize	plastid	44.95	22.17
Bra018708.1-P	Field mustard	nucleus	32.07	20.89

Protein Annotations

EnsemblPlants:Bra031960.1	EnsemblPlants:Bra031960.1-P	EnsemblPlantsGene:Bra031960	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI000254651D	UniProt:M4ET30	MapMan:16.5.2.1

Description

AT3G03950 (E=1e-093) ECT1 | protein binding

Coordinates

chrA02:+:26912527..26914398

Molecular Weight (calculated)

44792.7 Da

IEP (calculated)

6.884

GRAVY (calculated)

-0.773

Length

396 amino acids

Sequence
(BLAST)

001: MAGASSSSDS FPLLETSDWF QALSLGSDAS EVPRNHYKGS LQNQYGHVPS GAYTAPSSPG NERRPSMNGG DPFGSYDHPS GGYQDQSFGY GHNNNSNTFS
101: HLMMDPHNSS FDQFGYNDHL YSNHGLYGLY GNVIDSGHAY GTFGYDSWKL GRGWYPVDGY RKTRSFNYAR GYSEEKADRL NELCRGPRSS DVKKQDAPVV
201: DLQRYNGENF PETFTKEKFF VIKSYSEDDV HNSIKHGVWS STPTGNKKLT AAYYESSQEC CPVYLLFSVN ASGQFVGVAE MTGPVDFNKT VEYWQQDKWI
301: GCFPVKWHII KDVPNSFLRH VTIANNENKP VTNSRDTQEV SVEDGAKIIK IFKEYMSKTC ILDDFKFYET RQKMIRDKKI KQKKQVLDGA SVETIH

Best Arabidopsis Sequence Match ( AT3G03950.3 )
(BLAST)

001: MAGAASSDRL VTSFPLLDTA DLFQDLSLGS DANEVPMNFT KGSFQHPYGH APYGASSHGS ERRPNMNAGN LLNGGDSIGS YPWGYIPANY PSGGYPDPRF
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS

Arabidopsis Description

ECT1AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.