CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06717	Soybean	nucleus	91.81	91.25
KRH70155	Soybean	nucleus	64.34	67.3
CDY57677	Canola	mitochondrion	12.9	49.71
VIT_08s0007g07450.t01	Wine grape	cytosol	50.68	48.13
KRH26322	Soybean	cytosol	9.26	47.66
GSMUA_Achr7P01490_001	Banana	nucleus	39.3	46.25
CDY07437	Canola	nucleus	29.14	45.61
GSMUA_Achr4P22630_001	Banana	nucleus	42.79	45.41
CDY39299	Canola	nucleus	28.83	44.92
CDY56132	Canola	nucleus	30.35	44.74
GSMUA_Achr4P14820_001	Banana	cytosol	22.46	44.71
GSMUA_Achr5P02830_001	Banana	cytosol	41.73	44.64
Bra004105.1-P	Field mustard	nucleus	26.71	44.44
Bra008509.1-P	Field mustard	cytosol	28.38	44.21
CDY52966	Canola	cytosol	30.05	44.2
CDY50448	Canola	cytosol	17.0	43.92
GSMUA_Achr4P21380_001	Banana	nucleus	43.7	43.77
CDY69959	Canola	nucleus	26.1	43.11
KRH43005	Soybean	nucleus	46.13	43.0
GSMUA_Achr7P27220_001	Banana	cytosol	42.79	42.66
CDY21154	Canola	nucleus	26.25	42.51
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	39.61	42.44
Bra031960.1-P	Field mustard	nucleus	25.49	42.42
Bra036423.1-P	Field mustard	nucleus	26.1	42.36
KRH59123	Soybean	nucleus	45.22	42.09
AT3G03950.3	Thale cress	cytosol	27.31	42.06
CDY50867	Canola	nucleus	25.49	42.0
CDY42891	Canola	nucleus	25.49	42.0
CDY29972	Canola	nucleus	26.1	41.95
Os03t0748000-01	Rice	plasma membrane	41.12	41.0
AT5G61020.1	Thale cress	cytosol	30.5	40.61
CDX91541	Canola	mitochondrion	10.02	40.49
EER93461	Sorghum	nucleus	40.06	40.06
TraesCS5D01G396400.3	Wheat	nucleus	40.21	40.03
TraesCS5B01G391500.1	Wheat	nucleus	40.21	40.03
TraesCS5A01G386600.2	Wheat	nucleus	40.21	39.97
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	40.06	39.7
EER93313	Sorghum	cytosol	34.14	39.34
Zm00001d034005_P003	Maize	plasma membrane	39.0	38.94
Os03t0158500-01	Rice	nucleus	41.12	38.33
KXG40139	Sorghum	plastid	40.21	37.27
TraesCS5B01G433000.1	Wheat	cytosol	33.69	37.25
KRH36908	Soybean	cytosol	25.04	37.16
TraesCS5A01G431200.1	Wheat	nucleus	33.08	37.01
TraesCS5D01G439100.1	Wheat	nucleus	32.93	36.9
TraesCS4D01G273200.4	Wheat	cytosol	39.61	36.1
Os07t0170300-01	Rice	plasma membrane	32.93	36.05
TraesCS4A01G031600.2	Wheat	cytosol	39.45	35.67
TraesCS5A01G431100.1	Wheat	cytosol	34.6	35.51
KXG34475	Sorghum	cytosol	34.75	35.45
HORVU4Hr1G072940.4	Barley	cytosol	39.61	35.18
TraesCS5D01G439200.1	Wheat	cytosol	34.14	35.05
Zm00001d048424_P003	Maize	plastid	39.15	34.86
TraesCS5B01G432900.2	Wheat	extracellular	33.99	34.57
TraesCS4B01G274500.2	Wheat	plastid	40.06	34.42
Zm00001d007890_P002	Maize	mitochondrion	33.99	34.3
HORVU5Hr1G104380.1	Barley	plastid	33.54	33.43
Bra014253.1-P	Field mustard	cytosol	14.87	32.89
Bra018951.1-P	Field mustard	cytosol	12.9	32.82
Zm00001d027731_P012	Maize	plastid	39.91	32.75
HORVU5Hr1G104390.3	Barley	plastid	33.99	32.56
Zm00001d018896_P002	Maize	mitochondrion	34.45	32.15
Bra038524.1-P	Field mustard	cytosol	10.62	31.11
KRH46969	Soybean	endoplasmic reticulum, extracellular	30.5	31.07
KRH44697	Soybean	mitochondrion	30.5	30.55
KRH43645	Soybean	nucleus	26.4	30.05
KRH13810	Soybean	nucleus, plastid	25.95	29.64
KRH02430	Soybean	cytosol	28.53	27.09
KRH50636	Soybean	cytosol	28.38	26.91
KRH11876	Soybean	endoplasmic reticulum	27.47	25.82
KRH06073	Soybean	cytosol, nucleus, peroxisome	18.66	24.8

Protein Annotations

EMBL:ACUP02012035	EnsemblPlants:KRG94807	EnsemblPlantsGene:GLYMA_19G110800	EntrezGene:100818027	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF63	PFAM:PF04146	PFscan:PS50882	ProteinID:KRG94807	ProteinID:KRG94807.1	SEG:seg
UniParc:UPI000233E89C	UniProt:I1N874	MapMan:16.5.2.1	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:36458548..36462682

Molecular Weight (calculated)

71741.3 Da

IEP (calculated)

8.444

GRAVY (calculated)

-0.677

Length

659 amino acids

Sequence
(BLAST)

001: MAAVAPSSDK TADLLQNLTL DSESKAIGVA EPAKKNGPAF SNGAAKGRAK PFNPNSCFVP NGYPSAYYYG GYDGQGDWNA YSRYMNLDGG MAQGVYGDSC
101: SYMYHQGYGY TPYGTYAPPN SSSPMIQQDG QHYGLQQYQY PCSYYKSPAS ADVSFTPNKI SVPQGEISTA VDADRVASSN VMNKGHTVNM ANSDFTNKNG
201: FNPFLTSSQH TSLNTNDSYQ GTSLPAYASL SGYQGPRSTH GTQLPVPSDV SLVSDRQSKH GAKVGLSSSV VPVKDFTSQR NQRLPQPLPQ YVSMSGSRHP
301: SGLDLVSGFM NGMYPSNRMY SQYGNTFRPD SRFGSAGYGS RMGSFDSKFN GTGYGCGLKK SMDGFSELNK GPRAAKSSDN KNIKSLGPVT LLLKGQNLPV
401: KSDNKEVPPV PDKEQYNGKD FAENYSDAKF FVIKSYSEDD IHKSIKYSAW ASTPNGNKKL DAAYQEAKEK PGGCPIFLLF SVNTSGQFVG LAEMLGPVDF
501: GKTVDYWQQD RWTGCFSVKW HVIKDIPNSV LRHITLENNE NKPVTNSRDT QEVKFEKGVQ IAKIFKEHSS QTCILDDFGF YEAREKATQE KKSKEQQLPK
601: QVSKPSDFTF GTVTFPKSLD ATLMNEAATA NAAEGRMNAE GLVEGNGSTP TLGDSSKSC

Best Arabidopsis Sequence Match ( AT1G55500.4 )
(BLAST)

001: MSTVAPPADQ AADVLKKLSL DSKSRTLEIP EPTKKTGVYQ YGAMDSNGQV PSFDRSLSPM LPSDALDPSV FYVPNVYQQP YYYGYGSDYT GYTNSESVDM
101: TSGAYGENAS LVYPQGYGYA AFPYSPATSP APQLGGDGQL YGAQQYQYPF PLTASSGPFA SSVPASTQSK LSTNKAANSA SAGIPKGMNG SAPVKPLNQS
201: ALYGNSALGG GLAAGYQDPR YSYDGFYTPV SWHDGSNFSD VQRSVSGSGV ASSYSKANNN VPATRNQNSS SNSHYTSMYQ PASMTGYAAQ GYYDRVSPNK
301: SYGQYGSTVR SGMGYGSSGY GSRTNERGWL NTDNKYRSRG RGNSYFYGNE NIDGLNELNR GPRAKGTKAT EEVSSEEVKK QTFDESNTEE TVTCVLPDRE
401: ECNRDDFPVE YKDAKFFIIK SYSEDDVHKS IKYNVWASTP NGNKKLDAAY QEAQQKSSGC PVFLFFSVNA SGQFIGLAEM KGPVDFNKNI EYWQQDKWTG
501: SFPLKWHILK DVPNSLLKHI TLEYNENKPV TNSRDTQEVK LEQGLKVVKI FKEHNSKTCI LDDFSFYEAR QKTILEKKAK QQQSQKQARE ENG

Arabidopsis Description

ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.