Factsheet for Bra036423.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
plasma membrane 1
cytosol 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21154	Canola	nucleus	98.28	98.03
CDY29972	Canola	nucleus	93.1	92.2
Bra031960.1-P	Field mustard	nucleus	79.31	81.31
AT3G03950.3	Thale cress	cytosol	78.82	74.77
Bra004105.1-P	Field mustard	nucleus	39.66	40.66
Bra008509.1-P	Field mustard	cytosol	39.16	37.59
GSMUA_Achr4P14820_001	Banana	cytosol	27.59	33.84
GSMUA_Achr7P01490_001	Banana	nucleus	44.58	32.32
Bra018951.1-P	Field mustard	cytosol	19.21	30.12
Bra001506.1-P	Field mustard	nucleus	47.29	30.05
Bra027432.1-P	Field mustard	nucleus	46.8	29.97
GSMUA_Achr4P22630_001	Banana	nucleus	45.81	29.95
Bra014253.1-P	Field mustard	cytosol	21.92	29.87
GSMUA_Achr5P02830_001	Banana	cytosol	44.83	29.55
EER93313	Sorghum	cytosol	41.38	29.37
Bra038524.1-P	Field mustard	cytosol	16.26	29.33
EER93461	Sorghum	nucleus	47.29	29.14
GSMUA_Achr4P21380_001	Banana	nucleus	46.8	28.88
VIT_08s0007g07450.t01	Wine grape	cytosol	49.26	28.82
Os03t0748000-01	Rice	plasma membrane	46.8	28.74
Zm00001d034005_P003	Maize	plasma membrane	46.55	28.64
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	43.35	28.62
Bra039400.1-P	Field mustard	nucleus	44.83	28.62
Bra008406.1-P	Field mustard	cytosol	31.28	28.35
TraesCS5D01G396400.3	Wheat	nucleus	45.07	27.64
TraesCS5A01G386600.2	Wheat	nucleus	45.07	27.6
TraesCS5B01G391500.1	Wheat	nucleus	44.83	27.49
Os07t0170300-01	Rice	plasma membrane	40.64	27.41
Bra035104.1-P	Field mustard	cytosol	29.8	27.31
TraesCS5D01G439100.1	Wheat	nucleus	39.41	27.21
TraesCS5A01G431200.1	Wheat	nucleus	39.41	27.16
GSMUA_Achr7P27220_001	Banana	cytosol	44.09	27.08
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	44.34	27.07
TraesCS5B01G433000.1	Wheat	cytosol	39.41	26.85
KRH70155	Soybean	nucleus	41.38	26.67
KRG94807	Soybean	nucleus	42.36	26.1
TraesCS5A01G431100.1	Wheat	cytosol	41.13	26.01
Os03t0158500-01	Rice	nucleus	45.07	25.88
KXG40139	Sorghum	plastid	45.32	25.88
Bra034710.1-P	Field mustard	nucleus	37.68	25.76
TraesCS5D01G439200.1	Wheat	cytosol	40.64	25.7
Bra019988.1-P	Field mustard	nucleus	31.53	25.55
Bra010911.1-P	Field mustard	nucleus	32.76	25.53
TraesCS5B01G432900.2	Wheat	extracellular	40.64	25.46
KXG34475	Sorghum	cytosol	40.39	25.39
KRH06717	Soybean	nucleus	41.13	25.19
Bra003615.1-P	Field mustard	nucleus	31.53	25.15
HORVU5Hr1G104380.1	Barley	plastid	40.39	24.81
Bra039366.1-P	Field mustard	nucleus	36.7	24.79
Bra006780.1-P	Field mustard	cytosol	31.03	24.75
Zm00001d007890_P002	Maize	mitochondrion	39.41	24.5
Zm00001d048424_P003	Maize	plastid	43.84	24.05
HORVU4Hr1G072940.4	Barley	cytosol	43.84	23.99
TraesCS4D01G273200.4	Wheat	cytosol	42.61	23.93
TraesCS4A01G031600.2	Wheat	cytosol	42.86	23.87
Bra020382.1-P	Field mustard	nucleus	32.27	23.69
TraesCS4B01G274500.2	Wheat	plastid	44.34	23.47
HORVU5Hr1G104390.3	Barley	plastid	39.16	23.11
Zm00001d018896_P002	Maize	mitochondrion	40.15	23.09
Zm00001d027731_P012	Maize	plastid	45.07	22.79
Bra018708.1-P	Field mustard	nucleus	31.53	21.05

Protein Annotations

EnsemblPlants:Bra036423.1	EnsemblPlants:Bra036423.1-P	EnsemblPlantsGene:Bra036423	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI0002540F8E	UniProt:M4F5R7	MapMan:16.5.2.1

Description

AT3G03950 (E=5e-089) ECT1 | protein binding

Coordinates

chrA07:+:547609..549892

Molecular Weight (calculated)

45681.2 Da

IEP (calculated)

7.148

GRAVY (calculated)

-0.660

Length

406 amino acids

Sequence
(BLAST)

001: MAGTASSPDT LATGLSLLET ADLFQELSLG SDGSEASRNR NKGSLQHQYG HVPSGAFTAP SLHGSERRPN LNVGDFFGSY PWGYLPTNHP SGGYQDQSFG
101: YGHNSSLNTY SHLMNPHSSQ EVPSYEQFGY NDHMYSNNGL YGLYGNVIDS GHAYGTFGYD SWKLGRGWYP VDGYKKTKSF NYGRGYSEEK ADRLNELCRG
201: PRSSEGLNST VKQDSPVVEN FPETLVNAKF FVIKSYSEDD VHNSIKYGMW SSTPTGNKKL NAAYQESSQD CSVYLLFSVN ASGQFVGVAE MIGAVDFNKT
301: MEYWQQDKWI GCFPVKWRII KDVPNSLLRH ITLVNNENKP VTNSRDTQEV KLEDGIKIIK IFKEYMSKTC ILDDFKFYET RQKIIRDKKI KQKKQVLDGA
401: TVETIH

Best Arabidopsis Sequence Match ( AT3G03950.3 )
(BLAST)

001: MAGAASSDRL VTSFPLLDTA DLFQDLSLGS DANEVPMNFT KGSFQHPYGH APYGASSHGS ERRPNMNAGN LLNGGDSIGS YPWGYIPANY PSGGYPDPRF
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS

Arabidopsis Description

ECT1AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.