Factsheet for Bra019988.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93476	Canola	nucleus	98.0	98.2
AT1G09810.1	Thale cress	nucleus	71.26	75.96
KRH26322	Soybean	cytosol	14.37	56.25
GSMUA_Achr6P12810_001	Banana	nucleus	26.95	38.35
Bra031960.1-P	Field mustard	nucleus	25.15	31.82
Bra036423.1-P	Field mustard	nucleus	25.55	31.53
Bra004105.1-P	Field mustard	nucleus	24.75	31.31
Bra008509.1-P	Field mustard	cytosol	25.35	30.02
Bra008406.1-P	Field mustard	cytosol	26.55	29.69
Bra035104.1-P	Field mustard	cytosol	26.15	29.57
KRH06073	Soybean	cytosol, nucleus, peroxisome	28.94	29.23
Bra014253.1-P	Field mustard	cytosol	16.77	28.19
Bra018951.1-P	Field mustard	cytosol	14.57	28.19
Bra003615.1-P	Field mustard	nucleus	27.74	27.31
Solyc01g103540.2.1	Tomato	nucleus	29.74	26.85
Bra006780.1-P	Field mustard	cytosol	27.15	26.72
PGSC0003DMT400064041	Potato	cytosol	30.34	26.67
Bra038524.1-P	Field mustard	cytosol	11.78	26.22
Bra027432.1-P	Field mustard	nucleus	32.34	25.55
Bra001506.1-P	Field mustard	nucleus	32.14	25.2
Bra020382.1-P	Field mustard	nucleus	27.74	25.14
Bra034710.1-P	Field mustard	nucleus	29.14	24.58
VIT_12s0035g00970.t01	Wine grape	plastid	34.73	24.58
Bra039400.1-P	Field mustard	nucleus	30.94	24.37
Bra039366.1-P	Field mustard	nucleus	28.34	23.63
Bra010911.1-P	Field mustard	nucleus	24.55	23.61
Bra018708.1-P	Field mustard	nucleus	26.15	21.55
Os05t0105600-01	Rice	cytosol	27.35	21.47
Os04t0129300-01	Rice	nucleus	28.74	21.33
KXG21015	Sorghum	nucleus	26.75	20.52
TraesCS2D01G012200.1	Wheat	cytosol	27.94	19.72
TraesCS2A01G011400.1	Wheat	nucleus	27.94	19.69
HORVU2Hr1G023660.2	Barley	nucleus	27.74	19.61
TraesCS2B01G010200.1	Wheat	cytosol	27.35	19.19
HORVU2Hr1G001810.8	Barley	cytosol	27.94	17.77
Zm00001d048501_P002	Maize	cytosol	26.35	17.41

Protein Annotations

EnsemblPlants:Bra019988.1	EnsemblPlants:Bra019988.1-P	EnsemblPlantsGene:Bra019988	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI000253E926	UniProt:M4DTZ5	MapMan:16.5.2.1

Description

AT1G09810 (E=6e-162) ECT11 | ECT11 (evolutionarily conserved C-terminal region 11)

Coordinates

chrA06:-:3361287..3363915

Molecular Weight (calculated)

56607.4 Da

IEP (calculated)

8.517

GRAVY (calculated)

-0.898

Length

501 amino acids

Sequence
(BLAST)

001: MATERNAMDS ERGTVTDSDS TPKRHNEVFE ILLGELQTVT TAADSTPKKH DESPPTDDTS RMVTGSTTSS VTVSACADNG TGVVSSQPNK NGQAYATDFL
101: KASHRDKNNS SYNNYQDSNL HGDRAVRSYC WSQTSVSSPG NLNVYGQLPS FTQSHAFRPT FKGKQASGQF TKHANQKTSS VPYSGYYGNG NTNSGFKDHR
201: DGHRKPERNG ESDSLVEMKC GPRTSAKTHP PPSDSSSSSL KQNSSFVLDL RREMFNLPDF QTDYEDATFF VIKSYSEDDV HKSIKYSVWS STVNGNKKLD
301: AAYRDAEAKT LVDGKKRPIF LFFSVNASRQ FVGLAEMVGY VDMNKDLDFW QVDKWCGFFP VEWHVVKDVP NWELCHIVLH NNEGKAVTHT RDTQEIKLRE
401: GLQMLSIFKK FSAVTSLLDD MDFYEEREKS LRLKKEHKPA TLRMDLFKEK DYDYENGGNR RMNQDRGCNW SRTQQSLVNQ TKNLSIRGGY SVSKNNTRNP
501: R

Best Arabidopsis Sequence Match ( AT1G09810.1 )
(BLAST)

001: MATEKNTLDS EATFAQTVPA LDSTTKKQDE SPPKSTPSLT VTACANGSDV VSSQPNDNGQ AHTTDFRKGN HRDKNSSDVY ADSTLRGDRP KGSNCLSQTS
101: FSAPKPLGNF NGAGRLPPNT QAHAFRPPFK GKEAAGQFLT FSNQKTSCVP YSGYINGNSN NGFWDQRDHN KKPERNGESD YLVELKCGPR ANAKTRPPSE
201: SSPLKQNNSF ALALRREMYN LPDFQTDYED AKFFVIKSYS EDDVHKSIKY SVWSSTINGN KKLDAAFRDA ETKTLEDGKK RPIFLFFSVN ASRQFVGLAE
301: MVGYVDFNKD LDFWQVDKWS GFFPVEWHVV KDIPNWELRH IILDNNEDKP VTHTRDTHEI KLKEGLQMLS IFKKYSAVTF LLDDMDFYEE REKSLRAKKE
401: HKPATLRMDL FKEKDYDYEM EGNRRMNHQE RGYNWNRSSN SKTQASLVNQ TKYLSIRGYS GYKKNTGNST

Arabidopsis Description

ECT11Evolutionarily conserved C-terminal region 11 [Source:UniProtKB/TrEMBL;Acc:Q56XH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.