Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G012200.1 | Wheat | cytosol | 96.5 | 97.04 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 96.5 | 96.91 |
| HORVU2Hr1G023660.2 | Barley | nucleus | 91.74 | 92.38 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 88.8 | 80.46 |
| Os05t0105600-01 | Rice | cytosol | 51.68 | 57.84 |
| Os04t0129300-01 | Rice | nucleus | 52.52 | 55.56 |
| KXG21015 | Sorghum | nucleus | 49.58 | 54.21 |
| KRH26322 | Soybean | cytosol | 9.38 | 52.34 |
| Zm00001d048501_P002 | Maize | cytosol | 47.2 | 44.46 |
| GSMUA_Achr6P12810_001 | Banana | nucleus | 20.87 | 42.33 |
| AT1G09810.1 | Thale cress | nucleus | 19.05 | 28.94 |
| PGSC0003DMT400064041 | Potato | cytosol | 22.83 | 28.6 |
| Solyc01g103540.2.1 | Tomato | nucleus | 21.99 | 28.29 |
| CDX94944 | Canola | nucleus | 19.33 | 27.77 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 19.19 | 27.62 |
| CDX93476 | Canola | nucleus | 19.33 | 27.6 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 22.83 | 27.35 |
| Bra019988.1-P | Field mustard | nucleus | 19.19 | 27.35 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 24.51 | 26.43 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 23.67 | 26.32 |
| TraesCS3B01G301100.1 | Wheat | nucleus | 24.37 | 25.29 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 21.01 | 25.04 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 22.69 | 25.0 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 20.73 | 25.0 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 23.53 | 23.73 |
| TraesCS4B01G274500.2 | Wheat | plastid | 23.81 | 22.16 |
| TraesCS3B01G232300.2 | Wheat | cytosol | 19.61 | 20.38 |
| TraesCS4B01G179100.3 | Wheat | cytosol, nucleus, plastid | 19.33 | 19.33 |
| TraesCS1B01G128700.1 | Wheat | cytosol | 18.49 | 18.78 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G010200.1 | EnsemblPlantsGene:TraesCS2B01G010200 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF35 | PFAM:PF04146 |
| PFscan:PS50882 | SEG:seg | MapMan:16.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:5661615..5666703
Molecular Weight (calculated)
80420.1 Da
IEP (calculated)
7.309
GRAVY (calculated)
-0.803
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEAFDPPAS VAAATPEAEN TASLFTKKNI WSGAAAEGDD DSSPWPCTCP GDGVKSEEDA DFLSHANRAL SFLDYEAESS ECKYATDIGS HVYPKEAMSP
101: RSEYDRQRPY LPLSSCSWDS SSSLEAMSGN RDASGHVMAK GGTKSDIFAP RHDYLTSCPT TGPHMRRSYT EAAKVDCSFD CHPEHHYKGL DRFTPFANCN
201: GQSIECRSEI VDMPRGGRCV DEATSFSSRW CFKNGGRGSS LPGGLTYGDE IPSLSSRRCN GNGVLSRSSQ WHYGAEISSL SSRQGYGDEI PSLSNQKFNG
301: ISRSNHWNYS AEIPSLSCRQ SYRDEIPSLS SQKSNGISYP RQWQQYGADI PSFSSRQGYG EEVPTMSHHW RYRDKIPLYS GQRCHDAEAR RLSSYQQGPF
401: RGNRQPRDSF AHGIVSNQQA KMTATRHTGT RPRVSNRVVN STSNYRNGRR DNPPRNSEEI RDQVCGPRAS KVNNTSTPTV KKDILSPLVR RDQFNKSDFS
501: IQYEHAKFFM IKSYSEDDIH KGIKYNVWAS TPNGNSKLDT AFHDAQILMK EKGTKCPVFL LFSVNTSGQF VGLAEMLGPV DFKKTMDFWQ QNKWNGFFPV
601: VWHIIKDIPN RLFKHITLEN NDNRPVTFSR DTQEIGLPQG LEVLKIFKAY RHGTSILDDF DFYEEKENTR CARKGINADS LHEARLSYFG TDDLKSMGDI
701: EVNMESLNLH EPWD
101: RSEYDRQRPY LPLSSCSWDS SSSLEAMSGN RDASGHVMAK GGTKSDIFAP RHDYLTSCPT TGPHMRRSYT EAAKVDCSFD CHPEHHYKGL DRFTPFANCN
201: GQSIECRSEI VDMPRGGRCV DEATSFSSRW CFKNGGRGSS LPGGLTYGDE IPSLSSRRCN GNGVLSRSSQ WHYGAEISSL SSRQGYGDEI PSLSNQKFNG
301: ISRSNHWNYS AEIPSLSCRQ SYRDEIPSLS SQKSNGISYP RQWQQYGADI PSFSSRQGYG EEVPTMSHHW RYRDKIPLYS GQRCHDAEAR RLSSYQQGPF
401: RGNRQPRDSF AHGIVSNQQA KMTATRHTGT RPRVSNRVVN STSNYRNGRR DNPPRNSEEI RDQVCGPRAS KVNNTSTPTV KKDILSPLVR RDQFNKSDFS
501: IQYEHAKFFM IKSYSEDDIH KGIKYNVWAS TPNGNSKLDT AFHDAQILMK EKGTKCPVFL LFSVNTSGQF VGLAEMLGPV DFKKTMDFWQ QNKWNGFFPV
601: VWHIIKDIPN RLFKHITLEN NDNRPVTFSR DTQEIGLPQG LEVLKIFKAY RHGTSILDDF DFYEEKENTR CARKGINADS LHEARLSYFG TDDLKSMGDI
701: EVNMESLNLH EPWD
001: MTSHVPKHPR KSFEDMVKNL KVDPLAKVTA STTSMVSAKE NKNQSEAEPS YYETLETYQG LPCPYGGYYG YYYPGLDGSV GEAKDNGYYG YGTEVQYPVM
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
Arabidopsis Description
ECT8Evolutionarily conserved C-terminal region 8 [Source:UniProtKB/TrEMBL;Acc:Q9FPE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.