Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G012200.1 | Wheat | cytosol | 98.59 | 98.73 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 96.91 | 96.5 |
| HORVU2Hr1G023660.2 | Barley | nucleus | 91.84 | 92.1 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 89.59 | 80.84 |
| Os05t0105600-01 | Rice | cytosol | 51.76 | 57.68 |
| Os04t0129300-01 | Rice | nucleus | 52.74 | 55.56 |
| KXG21015 | Sorghum | nucleus | 50.07 | 54.52 |
| KRH26322 | Soybean | cytosol | 9.42 | 52.34 |
| Zm00001d048501_P002 | Maize | cytosol | 47.54 | 44.59 |
| GSMUA_Achr6P12810_001 | Banana | nucleus | 20.96 | 42.33 |
| AT1G09810.1 | Thale cress | nucleus | 19.41 | 29.36 |
| PGSC0003DMT400064041 | Potato | cytosol | 23.07 | 28.77 |
| Solyc01g103540.2.1 | Tomato | nucleus | 22.22 | 28.47 |
| CDX94944 | Canola | nucleus | 19.83 | 28.37 |
| Bra019988.1-P | Field mustard | nucleus | 19.69 | 27.94 |
| CDX93476 | Canola | nucleus | 19.55 | 27.8 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 19.27 | 27.62 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 22.78 | 27.5 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 24.19 | 26.79 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 24.47 | 26.24 |
| TraesCS3A01G267700.1 | Wheat | nucleus | 24.75 | 25.47 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 22.93 | 25.39 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 22.22 | 25.28 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 20.96 | 25.25 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 23.91 | 24.01 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 23.63 | 23.05 |
| TraesCS3A01G199100.2 | Wheat | cytosol | 19.13 | 19.74 |
| TraesCS4A01G125600.3 | Wheat | cytosol, nucleus, plastid | 19.69 | 19.47 |
| TraesCS1A01G105700.1 | Wheat | cytosol | 17.86 | 18.09 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G011400.1 | EnsemblPlantsGene:TraesCS2A01G011400 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF35 | PFAM:PF04146 |
| PFscan:PS50882 | SEG:seg | MapMan:16.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:4215829..4221327
Molecular Weight (calculated)
80135.5 Da
IEP (calculated)
6.993
GRAVY (calculated)
-0.827
Length
711 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEAFDPPAS AAAATPEADN GGASVFTRKN IWSDAAAEGD DDSLPWPWDG VKSEEDADFL SHANRALSFL DYEAESSECK YATDIGSHVY PKEAMSPQSE
101: YDRQRPYLPL SSCSWDSSSS LEAMSGNRDA SGHVMAKGGT KSDIFAPRHD YLTSGPTTGP HMRRSYTEAA KVDCSFDCHS EHHYKGLDRF TPFANCNGQS
201: IECRSEIVDM PRGGRCVDEA TSFSSRWCFE NGGRGSSLPG GLTYGDEIPS LSSRRCNGSG VLSRSSQWHY GAEISSLSSR QGYGDEIPSL SNQKFNGISR
301: SNHWNYSAEI PSLSRRQSYR DEIPSLSSQK SNGISYPRQW QQYGADIPSF STRQGYGEEV PTMSHHWRYR DKIPLYSGQR CHDAESRRLS SYQQGPFRGN
401: RQPRDSFAHG IVSNQQVKMT ATRHTGTRPR VSNRVVNSTS NYRNGRRDNP PRNSEEIRDQ VCGPRASKVN NTSTPTAKKD ILSPLVRRDQ FNKSDFSIQY
501: EQAKFFMIKS YSEDDIHKGI KYNVWASTPN GNSKLDTAFH DAQILMKEKG TKCPVFLLFS VNTSGQFVGL AEMLGPVDFK KTMDFWQQNK WNGFFPVVWH
601: IVKDIPNRLF KHITLENNDN RPVTFSRDTQ EIGLPQGLEV LKIFKAYRHG TSILDDFDFY EEKENTRCAR KGINADSLHE ARLSYFGTDD LKSMGDIEAN
701: MESLNLHEPW D
101: YDRQRPYLPL SSCSWDSSSS LEAMSGNRDA SGHVMAKGGT KSDIFAPRHD YLTSGPTTGP HMRRSYTEAA KVDCSFDCHS EHHYKGLDRF TPFANCNGQS
201: IECRSEIVDM PRGGRCVDEA TSFSSRWCFE NGGRGSSLPG GLTYGDEIPS LSSRRCNGSG VLSRSSQWHY GAEISSLSSR QGYGDEIPSL SNQKFNGISR
301: SNHWNYSAEI PSLSRRQSYR DEIPSLSSQK SNGISYPRQW QQYGADIPSF STRQGYGEEV PTMSHHWRYR DKIPLYSGQR CHDAESRRLS SYQQGPFRGN
401: RQPRDSFAHG IVSNQQVKMT ATRHTGTRPR VSNRVVNSTS NYRNGRRDNP PRNSEEIRDQ VCGPRASKVN NTSTPTAKKD ILSPLVRRDQ FNKSDFSIQY
501: EQAKFFMIKS YSEDDIHKGI KYNVWASTPN GNSKLDTAFH DAQILMKEKG TKCPVFLLFS VNTSGQFVGL AEMLGPVDFK KTMDFWQQNK WNGFFPVVWH
601: IVKDIPNRLF KHITLENNDN RPVTFSRDTQ EIGLPQGLEV LKIFKAYRHG TSILDDFDFY EEKENTRCAR KGINADSLHE ARLSYFGTDD LKSMGDIEAN
701: MESLNLHEPW D
001: MTSHVPKHPR KSFEDMVKNL KVDPLAKVTA STTSMVSAKE NKNQSEAEPS YYETLETYQG LPCPYGGYYG YYYPGLDGSV GEAKDNGYYG YGTEVQYPVM
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
Arabidopsis Description
ECT8Evolutionarily conserved C-terminal region 8 [Source:UniProtKB/TrEMBL;Acc:Q9FPE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.