Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plasma membrane 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0105600-01 | Rice | cytosol | 50.52 | 53.45 |
| HORVU2Hr1G023660.2 | Barley | nucleus | 56.0 | 53.31 |
| KRH26322 | Soybean | cytosol | 10.07 | 53.12 |
| TraesCS2D01G012200.1 | Wheat | cytosol | 55.85 | 53.1 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 55.56 | 52.74 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 55.56 | 52.52 |
| KXG21015 | Sorghum | nucleus | 48.15 | 49.77 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 55.26 | 47.34 |
| Zm00001d048501_P002 | Maize | cytosol | 47.26 | 42.08 |
| GSMUA_Achr6P12810_001 | Banana | nucleus | 21.33 | 40.91 |
| AT1G09810.1 | Thale cress | nucleus | 21.33 | 30.64 |
| CDX94944 | Canola | nucleus | 21.33 | 28.97 |
| Bra019988.1-P | Field mustard | nucleus | 21.33 | 28.74 |
| CDX93476 | Canola | nucleus | 21.19 | 28.6 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 20.59 | 28.02 |
| Solyc01g103540.2.1 | Tomato | nucleus | 22.67 | 27.57 |
| PGSC0003DMT400064041 | Potato | cytosol | 23.11 | 27.37 |
| Os01t0679900-01 | Rice | nucleus | 24.44 | 27.09 |
| Os07t0170300-01 | Rice | plasma membrane | 23.7 | 26.58 |
| Os08t0556000-01 | Rice | nucleus | 24.44 | 26.44 |
| Os03t0748000-01 | Rice | plasma membrane | 25.48 | 26.02 |
| Os04t0608800-01 | Rice | nucleus | 21.78 | 25.88 |
| Os08t0224200-01 | Rice | mitochondrion | 22.81 | 24.88 |
| Os03t0158500-01 | Rice | nucleus | 24.59 | 23.48 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 24.59 | 23.45 |
| Os03t0317000-01 | Rice | plasma membrane | 21.63 | 20.59 |
| Os01t0329800-01 | Rice | cytosol | 19.26 | 18.36 |
Protein Annotations
| EMBL:AK109511 | EnsemblPlants:Os04t0129300-01 | EnsemblPlantsGene:Os04g0129300 | EntrezGene:4334996 | Gene3D:3.10.590.10 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 |
| PANTHER:PTHR12357:SF35 | PFAM:PF04146 | PFscan:PS50882 | ProteinID:BAF14004.1 | ProteinID:BAS87697.1 | RefSeq:XP_015633919.1 |
| RefSeq:XP_015633920.1 | SEG:seg | UniParc:UPI0000DD8F27 | UniProt:Q0JF83 | MapMan:16.5.2.1 | : |
Description
YT521-B-like protein family protein. (Os04t0129300-01)
Coordinates
chr4:+:1843006..1848257
Molecular Weight (calculated)
76442.7 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.909
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEPSDPPMS ALSHTEGDSS GFTRNNDRND DAVGGEDSTS SYQPCNSMKC KDGTQIMSLA NEDVSNLASD CQEPPSESNH AISHGSNTDS KEEMSSGSGY
101: RRQQSCFSSS TCSWRSSSEV ESVSSTPDGS GDVVGNMSVR SKTFERRPDH IASYPSASPD IRRLYAAEGK ADFTLDYHSE ERWSRRSNQS TAFRTSNGQS
201: IEHHSEIVDI PRQANSMDET TSSSSQWSFD NWGPSLPRGM QYGDEIPSLS SQNYGARIPS LSSRQSYGDE IPSLSRNCNY ASRQSYGDEI PSLSSRHCNS
301: FSSRQSYGDE IPSLSRHCNA RSSRQNYGDE IPSLSNSDYQ CYQDRIPLHH RQWCHDAEAH PQLNYGRGAS HGNRYSRDSF VSSIATNQRF KMGTGKHTVT
401: RSDHHRTIKN DNVCKHSDDT LEQVRGPRAN KLENATRSKI QEDIRSPLVR RDQFNRPDFI VEYEQAKFFM IKSYSEDDIH KGIKYNVWAS TPHGNNKLDA
501: AFREAQILIK EKGKKCPVFL FFSVNSSGQF VGLAEILGPV DFKKTMDFWK LDRWNGFFPV TWHIIKDIPN RLFKHITLEN NDNRIVTFSR DTQEIGLLQG
601: LKMLKIFKDY DQETSLLDDF NFYEEKESAR CAKKGINAES THEARLLFFG TGARHSDDFK SMENLEASME NTILY
101: RRQQSCFSSS TCSWRSSSEV ESVSSTPDGS GDVVGNMSVR SKTFERRPDH IASYPSASPD IRRLYAAEGK ADFTLDYHSE ERWSRRSNQS TAFRTSNGQS
201: IEHHSEIVDI PRQANSMDET TSSSSQWSFD NWGPSLPRGM QYGDEIPSLS SQNYGARIPS LSSRQSYGDE IPSLSRNCNY ASRQSYGDEI PSLSSRHCNS
301: FSSRQSYGDE IPSLSRHCNA RSSRQNYGDE IPSLSNSDYQ CYQDRIPLHH RQWCHDAEAH PQLNYGRGAS HGNRYSRDSF VSSIATNQRF KMGTGKHTVT
401: RSDHHRTIKN DNVCKHSDDT LEQVRGPRAN KLENATRSKI QEDIRSPLVR RDQFNRPDFI VEYEQAKFFM IKSYSEDDIH KGIKYNVWAS TPHGNNKLDA
501: AFREAQILIK EKGKKCPVFL FFSVNSSGQF VGLAEILGPV DFKKTMDFWK LDRWNGFFPV TWHIIKDIPN RLFKHITLEN NDNRIVTFSR DTQEIGLLQG
601: LKMLKIFKDY DQETSLLDDF NFYEEKESAR CAKKGINAES THEARLLFFG TGARHSDDFK SMENLEASME NTILY
001: MDSNGQVPSF DRSLSPMLPS DALDPSVFYV PNVYQQPYYY GYGSDYTGYT NSESVDMTSG YGYAAFPYSP ATSPAPQLGG DGQLYGAQQY QYPFPLTASS
101: GPFASSVPAS TQSKLSTNKA ANSASAGIPK GMNGSAPVKP LNQSALYGNS ALGGGLAAGY QDPRYSYDGF YTPVSWHDGS NFSDVQRSVS GSGVASSYSK
201: ANNNVPATRN QNSSSNSHYT SMYQPASMTG YAAQGYYDRV SPNKSYGQYG STVRSGMGYG SSGYGSRTNE RGWLNTDNKY RSRGRGNSYF YGNENIDGLN
301: ELNRGPRAKG TKATEEVSSE EVKKQTFDES NTEETVTCVL PDREECNRDD FPVEYKDAKF FIIKSYSEDD VHKSIKYNVW ASTPNGNKKL DAAYQEAQQK
401: SSGCPVFLFF SVNASGQFIG LAEMKGPVDF NKNIEYWQQD KWTGSFPLKW HILKDVPNSL LKHITLEYNE NKPVTNSRDT QEVKLEQGLK VVKIFKEHNS
501: KTCILDDFSF YEARQKTILE KKAKQQQSQK QVWEGKTNDE KPGTVDSTM
101: GPFASSVPAS TQSKLSTNKA ANSASAGIPK GMNGSAPVKP LNQSALYGNS ALGGGLAAGY QDPRYSYDGF YTPVSWHDGS NFSDVQRSVS GSGVASSYSK
201: ANNNVPATRN QNSSSNSHYT SMYQPASMTG YAAQGYYDRV SPNKSYGQYG STVRSGMGYG SSGYGSRTNE RGWLNTDNKY RSRGRGNSYF YGNENIDGLN
301: ELNRGPRAKG TKATEEVSSE EVKKQTFDES NTEETVTCVL PDREECNRDD FPVEYKDAKF FIIKSYSEDD VHKSIKYNVW ASTPNGNKKL DAAYQEAQQK
401: SSGCPVFLFF SVNASGQFIG LAEMKGPVDF NKNIEYWQQD KWTGSFPLKW HILKDVPNSL LKHITLEYNE NKPVTNSRDT QEVKLEQGLK VVKIFKEHNS
501: KTCILDDFSF YEARQKTILE KKAKQQQSQK QVWEGKTNDE KPGTVDSTM
Arabidopsis Description
ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.