Factsheet for Os01t0329800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G199100.2	Wheat	cytosol	64.69	66.47
TraesCS3D01G199400.2	Wheat	cytosol	64.12	65.99
TraesCS3B01G232300.2	Wheat	cytosol	63.7	65.65
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	59.46	64.37
Zm00001d034996_P005	Maize	cytosol	56.5	58.14
KXG24185	Sorghum	nucleus	58.9	56.89
Zm00001d049729_P008	Maize	cytosol	56.92	55.97
KRH36908	Soybean	cytosol	23.02	36.71
CDY43306	Canola	cytosol	25.42	29.36
Bra018708.1-P	Field mustard	nucleus	25.14	29.28
CDX93645	Canola	nucleus	25.0	28.92
AT1G48110.2	Thale cress	nucleus	25.85	28.64
AT3G17330.1	Thale cress	nucleus	23.87	28.4
KRH02430	Soybean	cytosol	27.12	27.67
VIT_05s0020g00460.t01	Wine grape	cytosol	27.68	27.45
KRH50636	Soybean	cytosol	26.55	27.05
Solyc12g099090.1.1	Tomato	cytosol	25.71	26.38
PGSC0003DMT400011739	Potato	cytosol	25.85	26.18
Os04t0608800-01	Rice	nucleus	20.9	26.06
KRH11876	Soybean	endoplasmic reticulum	25.14	25.39
Os08t0556000-01	Rice	nucleus	22.32	25.32
Os01t0679900-01	Rice	nucleus	21.19	24.63
Os07t0170300-01	Rice	plasma membrane	20.62	24.25
Os03t0748000-01	Rice	plasma membrane	22.46	24.05
Os03t0158500-01	Rice	nucleus	23.45	23.48
Os03t0317000-01	Rice	plasma membrane	23.02	22.99
Os08t0224200-01	Rice	mitochondrion	20.06	22.94
Os05t0105600-01	Rice	cytosol	19.21	21.32
Os04t0129300-01	Rice	nucleus	18.36	19.26

Protein Annotations

EnsemblPlants:Os01t0329800-01	EnsemblPlantsGene:Os01g0329800	EntrezGene:4326985	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF26
PFAM:PF04146	PFscan:PS50882	ProteinID:BAD54713.1	ProteinID:BAF04837.1	ProteinID:BAS71905.1	RefSeq:XP_015622436.1
RefSeq:XP_015622437.1	SEG:seg	UniParc:UPI0000446A96	UniProt:Q5ZDR1	MapMan:16.5.2.1	:

Description

incompatible strain of P. avenae-induced gene 1YT521-B-like protein family protein. (Os01t0329800-01);Hypothetical conserved gene. (Os01t0329800-02)

Coordinates

chr1:+:12725141..12730824

Molecular Weight (calculated)

78209.0 Da

IEP (calculated)

8.686

GRAVY (calculated)

-0.564

Length

708 amino acids

Sequence
(BLAST)

001: MEMGMTPEQI YGQNVYVPAT ANPYPYGYTE VGSPTEWYNN QSSLGYDGQD IYFPGFQTEG TQCMYYAAPD NGSGHPSYSP YPINSSFIVD GSYLPLEYVG
101: DAADQTCQIV PSPYYVPTIL PYAHDNVLGN TTAPLHPPVY VPTLPSYTVT STNHALPSVP PVATKNDVIA NPPIQSTIVT SKQFLDHASD PKVQLRNPIP
201: LKKELADGSM MPVKYPHTSQ AFSNFPERRS AAKHSPQEKF SVNNGSGFVG SNVQRWAAAE KFEPNSNLSG RIGSASPKMK LSNVDGLGGA DKPCGQKSSA
301: IIAKSYTSRL SVGDPEGTIV IRCNQYNSDD LRVDYPFAKF FVIKSIGEDD VHKSIKYGVW SSSSSGNSKL DIAFKDANRI AKRNSTKCPV FLFFSVNGSG
401: LFCGMAEMVG PVDFHKDMDF WCQDKWTGSF PVRWHIVKDV PNYTLQHILL QNNENKPVTH SRDTQEIPYV PGISMLKILK AIKVKECLLD DFMKYEEDEA
501: RSKHYFRRSK LSHNAPDFVP VAQRRKDVTD VRQPKSGNVL IDRTPVIQNM SVKPQGSNAI KPQDQCLQVV EKQASDDGKE NRHQENRNVR QANDKVVKTG
601: TKQPQASTVK TSVDSKQQYW KKVEFPGQNP NSAVHGSSKA HEKHLNESKA PEKHSNGANC SSATVSLKTA REETIVARVS SLAISYQNSS VDVVKIGSMP
701: VLVNKANV

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.