Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plasma membrane 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G008330.2 | Barley | nucleus | 83.65 | 81.31 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 83.33 | 81.0 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 83.01 | 80.69 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 83.01 | 80.69 |
| KXG25412 | Sorghum | cytosol | 80.77 | 78.87 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 78.04 | 77.92 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 74.36 | 77.46 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 77.4 | 77.28 |
| Zm00001d031981_P002 | Maize | cytosol | 76.92 | 73.73 |
| CDY51902 | Canola | cytosol | 14.1 | 56.77 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 40.87 | 53.8 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 49.52 | 53.18 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 52.4 | 50.39 |
| VIT_09s0054g01600.t01 | Wine grape | nucleus | 53.21 | 49.85 |
| Bra034710.1-P | Field mustard | nucleus | 47.28 | 49.66 |
| CDY23562 | Canola | nucleus | 48.72 | 49.03 |
| AT3G13060.2 | Thale cress | nucleus | 49.52 | 48.74 |
| CDY44025 | Canola | nucleus | 48.56 | 48.71 |
| Bra039366.1-P | Field mustard | nucleus | 46.47 | 48.25 |
| CDY24224 | Canola | nucleus | 46.96 | 47.72 |
| CDY43378 | Canola | nucleus | 46.79 | 47.56 |
| KRH46969 | Soybean | endoplasmic reticulum, extracellular | 48.4 | 46.68 |
| KRH44697 | Soybean | mitochondrion | 48.56 | 46.05 |
| Os04t0608800-01 | Rice | nucleus | 41.19 | 45.25 |
| Os08t0224200-01 | Rice | mitochondrion | 44.87 | 45.23 |
| VIT_01s0010g03690.t01 | Wine grape | cytosol | 41.19 | 44.93 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 52.56 | 42.54 |
| Bra006780.1-P | Field mustard | cytosol | 31.89 | 39.1 |
| CDY58572 | Canola | nucleus | 31.41 | 38.66 |
| CDX88661 | Canola | nucleus | 31.57 | 38.63 |
| AT5G58190.2 | Thale cress | nucleus | 32.37 | 38.26 |
| CDY02802 | Canola | nucleus | 32.69 | 38.2 |
| CDY32718 | Canola | nucleus | 31.89 | 37.62 |
| Solyc05g032850.2.1 | Tomato | nucleus | 35.58 | 36.76 |
| Bra020382.1-P | Field mustard | nucleus | 32.21 | 36.35 |
| CDX90116 | Canola | nucleus | 29.33 | 35.12 |
| CDY67303 | Canola | nucleus | 29.33 | 35.12 |
| Bra010911.1-P | Field mustard | nucleus | 29.17 | 34.93 |
| VIT_11s0065g00160.t01 | Wine grape | nucleus | 40.38 | 34.29 |
| CDY11758 | Canola | nucleus, plastid | 29.97 | 33.75 |
| Os03t0748000-01 | Rice | plasma membrane | 34.62 | 32.68 |
| AT1G27960.1 | Thale cress | cytosol | 28.04 | 32.47 |
| Os07t0170300-01 | Rice | plasma membrane | 30.45 | 31.56 |
| Os01t0679900-01 | Rice | nucleus | 30.13 | 30.87 |
| Os03t0158500-01 | Rice | nucleus | 34.46 | 30.41 |
| Os05t0105600-01 | Rice | cytosol | 27.08 | 26.49 |
| Os03t0317000-01 | Rice | plasma membrane | 28.21 | 24.82 |
| Os04t0129300-01 | Rice | nucleus | 26.44 | 24.44 |
| Os01t0329800-01 | Rice | cytosol | 25.32 | 22.32 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:4346283 | ProteinID:BAD09069.1 | ProteinID:BAD10396.1 | ProteinID:BAF24386.1 |
| ProteinID:BAT06644.1 | ProteinID:BAT06645.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR007275 | EnsemblPlantsGene:Os08g0556000 | EnsemblPlants:Os08t0556000-01 | PFAM:PF04146 | PFscan:PS50882 | PANTHER:PTHR12357 |
| PANTHER:PTHR12357:SF57 | UniProt:Q6Z0T2 | UniParc:UPI000023ACEF | RefSeq:XP_015650656.1 | InterPro:YTH_domain | SEG:seg |
Description
Similar to YTH domain protein 2 (High-glucose-regulated protein 8) (NY-REN-2 antigen) (CLL-associated antigen KW-14). (Os08t0556000-01);Similar to predicted protein. (Os08t0556000-02)
Coordinates
chr8:-:27825035..27830293
Molecular Weight (calculated)
68269.8 Da
IEP (calculated)
4.930
GRAVY (calculated)
-0.707
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MESAHGGSDR PGSMDSQEPR VDAEQKPVLS DNPEEQTIPS KDEKVLEPTI SHDSNGINLP SEGQAQAGTS NIGGGHNAAY PQTMYSSQAQ PFYYQGPGYD
101: NPSNEWDGYP PYVSVEGLEA GPAVVYNDDP QLMYHGGYGY DPYAHYSPIS TPVPAAVSGD GQLYSPQQFS FSAPYYQQSV PPGMPYLSSP TPISQGEAMV
201: PIDPTQGAFI AETLSPNSFL FGPRPEWFRS SEGNGSFPSP AASPQPAGGV SGPFGQSNFP MASGMQSPQH RPFYGFGTPS DSYGRVFSHG GYFPQATNYG
301: GPFPSFGLNG TSSIPMEKGR RRGRGNALLC SCNGSLDFLN EQSRGPRATR PKKQPEDGGK DEKPSAGVDC ELYNRPDFVT EYKNARFFII KSYSEDNVHK
401: SIKYGVWAST TNGNKKLDSA YREAKEKEEH CPIFLLFSVN ASAQFCGVAE MIGPVDFEKS VDYWQQDKWT GQFPVKWHIV KDVPNNLFRH IILENNDNKP
501: VTNSRDTQEV KLEQGMEMLK IFKDHEEDAS ILDDFDFYEE RERALLDNKA RLHQQHQLPS STVVEPKKPL TVATDLVGHI TKSFAQAVRL GEAKNVSPNS
601: ADKGASGDSS VAAKPLEVKE AGLA
101: NPSNEWDGYP PYVSVEGLEA GPAVVYNDDP QLMYHGGYGY DPYAHYSPIS TPVPAAVSGD GQLYSPQQFS FSAPYYQQSV PPGMPYLSSP TPISQGEAMV
201: PIDPTQGAFI AETLSPNSFL FGPRPEWFRS SEGNGSFPSP AASPQPAGGV SGPFGQSNFP MASGMQSPQH RPFYGFGTPS DSYGRVFSHG GYFPQATNYG
301: GPFPSFGLNG TSSIPMEKGR RRGRGNALLC SCNGSLDFLN EQSRGPRATR PKKQPEDGGK DEKPSAGVDC ELYNRPDFVT EYKNARFFII KSYSEDNVHK
401: SIKYGVWAST TNGNKKLDSA YREAKEKEEH CPIFLLFSVN ASAQFCGVAE MIGPVDFEKS VDYWQQDKWT GQFPVKWHIV KDVPNNLFRH IILENNDNKP
501: VTNSRDTQEV KLEQGMEMLK IFKDHEEDAS ILDDFDFYEE RERALLDNKA RLHQQHQLPS STVVEPKKPL TVATDLVGHI TKSFAQAVRL GEAKNVSPNS
601: ADKGASGDSS VAAKPLEVKE AGLA
001: MNTEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY VNVEGLDITS
101: PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR QSYHPHPIGP
201: FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG SNYGSRLISN
301: VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL FIIKSYSEDN
401: VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ FRHIILENND
501: NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF AQVVRLDEGS
601: KEAVKASSSP DAITTAAVSS GQSN
101: PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR QSYHPHPIGP
201: FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG SNYGSRLISN
301: VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL FIIKSYSEDN
401: VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ FRHIILENND
501: NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF AQVVRLDEGS
601: KEAVKASSSP DAITTAAVSS GQSN
Arabidopsis Description
ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.