Factsheet for TraesCS7B01G174500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G276800.4	Wheat	nucleus	97.0	92.96
TraesCS7A01G276800.3	Wheat	nucleus	97.0	92.96
TraesCS1B01G057800.3	Wheat	nucleus	84.64	78.97
Os08t0556000-01	Rice	nucleus	77.46	74.36
KXG25412	Sorghum	cytosol	70.95	66.51
Zm00001d031981_P002	Maize	cytosol	67.78	62.37
HORVU7Hr1G058250.46	Barley	cytosol, plastid	44.41	56.12
CDY51902	Canola	cytosol	13.69	52.9
GSMUA_Achr4P12480_001	Banana	cytosol	45.58	46.99
Bra034710.1-P	Field mustard	nucleus	44.74	45.12
GSMUA_Achr4P11560_001	Banana	nucleus	47.25	43.61
CDY23562	Canola	nucleus	45.08	43.55
VIT_09s0054g01600.t01	Wine grape	nucleus	48.41	43.54
CDY44025	Canola	nucleus	45.08	43.41
AT3G13060.2	Thale cress	nucleus	45.08	42.59
Bra039366.1-P	Field mustard	nucleus	42.07	41.93
CDY43378	Canola	nucleus	42.57	41.53
CDY24224	Canola	nucleus	42.4	41.37
VIT_01s0010g03690.t01	Wine grape	cytosol	39.23	41.08
KRH46969	Soybean	endoplasmic reticulum, extracellular	43.57	40.34
TraesCS7B01G182100.2	Wheat	cytosol	39.4	39.86
KRH44697	Soybean	mitochondrion	43.74	39.82
GSMUA_Achr4P04600_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	48.08	37.35
Bra006780.1-P	Field mustard	cytosol	30.55	35.95
CDY58572	Canola	nucleus	30.05	35.5
CDX88661	Canola	nucleus	30.05	35.29
CDY02802	Canola	nucleus	30.55	34.27
CDY32718	Canola	nucleus	30.05	34.03
AT5G58190.2	Thale cress	nucleus	29.88	33.9
Solyc05g032850.2.1	Tomato	nucleus	33.56	33.28
Bra020382.1-P	Field mustard	nucleus	30.05	32.55
Bra010911.1-P	Field mustard	nucleus	27.55	31.67
CDY67303	Canola	nucleus	27.55	31.67
CDX90116	Canola	nucleus	27.55	31.67
VIT_11s0065g00160.t01	Wine grape	nucleus	37.4	30.48
CDY11758	Canola	nucleus, plastid	28.05	30.32
AT1G27960.1	Thale cress	cytosol	27.21	30.24
TraesCS5B01G433000.1	Wheat	cytosol	29.88	30.03
TraesCS5B01G391500.1	Wheat	nucleus	31.89	28.85
TraesCS4B01G274500.2	Wheat	plastid	34.22	26.73
TraesCS5B01G432900.2	Wheat	extracellular	28.71	26.54
TraesCS3B01G301100.1	Wheat	nucleus	29.22	25.44
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	28.05	23.53
TraesCS2B01G010200.1	Wheat	cytosol	25.04	21.01
TraesCS1B01G128700.1	Wheat	cytosol	22.7	19.35
TraesCS3B01G232300.2	Wheat	cytosol	22.04	19.21

Protein Annotations

EnsemblPlants:TraesCS7B01G174500.1	EnsemblPlantsGene:TraesCS7B01G174500	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF57	PFAM:PF04146
PFscan:PS50882	SEG:seg	MapMan:16.5.2.1	:	:	:

Description

No Description!

Coordinates

chr7B:-:245593840..245618979

Molecular Weight (calculated)

66229.3 Da

IEP (calculated)

6.464

GRAVY (calculated)

-0.668

Length

599 amino acids

Sequence
(BLAST)

001: MESVSERTGA MDSPEPRIET IPRKDEKTVK PTISLDSSVI NLPSEGQVQA VTSNIGGEHR AAYPQHIYSS QAQPFYYQGT GYENLPNECD VYPPYTSVDG
101: LEVGPAVIYN EDPSMMYHGG YGYDPYAHYS PISTPVSAGV SGNGSPTPVS QGETMMPIDP TQSAFIADTL SPNSFLFGPR PEWFRSSQGT GSFLSPATSP
201: QPLGDVSGAF GQSNFPMASG MMPPQQKSFY GFGTPSDSYG RRFSHRGSFP HTTNYGSPFP GYGLNGRSLI PVDKERRRGR GNPLLCSFVG SLDFLNEQSR
301: GPRSTRPKKQ PEDNSKDEKS SAGLDQGSYN RTDFVTEYKN ARFFIIKSYS EDNVHKSIKY GVWASTTNGN KKLDGAYHEV KKEEHCPIFL LFSVNASAQF
401: CGVAEMTGPV NFEKSVDYWQ QDKWTGQFPV NWHILKDVPN NLFRHIILEN NEHKPVTNSR DTQEVKLEQG QEMLKIFKDH EEDASILDDF DFYEEREKAL
501: LENKARLYQQ QQISSSSIAE PKKPSTVPTD LVGHIAKNCS FLEPKKPLTV PTDMVGHITK TFAQAVRLGK AKSVSPLGKK GPAGDLSVAA KPVEVRESG

Best Arabidopsis Sequence Match ( AT3G13060.1 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.