Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G109300.1 | Wheat | cytosol | 97.87 | 97.45 |
| TraesCS1A01G105700.1 | Wheat | cytosol | 94.31 | 94.44 |
| Zm00001d010826_P001 | Maize | cytosol | 29.73 | 50.48 |
| OQU77486 | Sorghum | cytosol | 50.36 | 50.0 |
| TraesCS3B01G232300.2 | Wheat | cytosol | 39.69 | 40.61 |
| KRH36908 | Soybean | cytosol | 21.48 | 34.01 |
| Bra018708.1-P | Field mustard | nucleus | 22.9 | 26.48 |
| CDX93645 | Canola | nucleus | 22.62 | 25.98 |
| CDY43306 | Canola | cytosol | 22.48 | 25.77 |
| AT3G17330.1 | Thale cress | nucleus | 21.62 | 25.55 |
| VIT_05s0020g00460.t01 | Wine grape | cytosol | 25.75 | 25.35 |
| KRH02430 | Soybean | cytosol | 24.32 | 24.64 |
| KRH50636 | Soybean | cytosol | 24.32 | 24.6 |
| AT1G48110.2 | Thale cress | nucleus | 22.05 | 24.26 |
| KRH11876 | Soybean | endoplasmic reticulum | 23.9 | 23.97 |
| Solyc12g099090.1.1 | Tomato | cytosol | 23.47 | 23.91 |
| PGSC0003DMT400011739 | Potato | cytosol | 23.33 | 23.46 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 19.35 | 22.7 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 18.49 | 21.96 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 19.91 | 21.81 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 17.78 | 20.97 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 19.63 | 20.85 |
| TraesCS3B01G301100.1 | Wheat | nucleus | 19.06 | 19.48 |
| TraesCS4B01G179100.3 | Wheat | cytosol, nucleus, plastid | 19.2 | 18.91 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 17.35 | 18.83 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 18.78 | 18.49 |
| TraesCS4B01G274500.2 | Wheat | plastid | 19.77 | 18.12 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G128700.1 | EnsemblPlantsGene:TraesCS1B01G128700 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF26 | PFAM:PF04146 |
| PFscan:PS50882 | MapMan:16.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:158309702..158313089
Molecular Weight (calculated)
77761.4 Da
IEP (calculated)
8.785
GRAVY (calculated)
-0.447
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLEANSELI FGEEFCFPAN ATYYPTPYGP TGITLPAELY EHQAIWRCGD QDLHYLGQQA EGTSYSYYVV PDYGIAHSPR GPYPSGHCAI ADGRFARSRE
101: YLAKTADIAC HQPVPIPHYD LPSAAQWGPA STSQTLMCND SLFIPTDQGQ SFPVVPKKGI TWNPSLQSTS VSSKKFENHA MLSTVQLHST DPWKQNLAAG
201: SGTMVPAKLG RALQASRHSL HGGVPPVKSS PQTNPSYNYN ASHVGSDLRK MAIAEKFQPS SKPRSYVNGL TGKLSSVCRL NLSKEKQPRG STSSEIVATS
301: YTSRLRIGNP EGKIIIKTDQ YNRDDFEVVY PNAKFFVIKS WGEANVHKSI KYGVWSSGLQ GNKKLDSAFR DAQMIAASSS TLCPVFLFFS VNESNHFCGV
401: AEMVGPVDFQ KDMDFWSMDR WVGSFPVRWH IIKNIPNVAL KCILLRNNED KPVTSSKNTQ EIHYVPGTSM LRIFKGSKTN GCLLDCFMLY EAEEARGRKC
501: RMSKLRRDAP RFIPVPKLSL RHAYVPRQPK ADRILMDRII RETHYLAGNG MQQSSWEEPG NLARYSAKAS AQKENRSSGK QAREDVVKAV IYQQQPLASN
601: MPAGPAGGQL TWEEVEVALV EKDRPQTAAN ISSKAPEESP TEVKNALVHS ASSTPETIYE EKKVIGEHCA RAISPPMSEA CSSCLIGDVL RIGSMLVPMK
701: MSN
101: YLAKTADIAC HQPVPIPHYD LPSAAQWGPA STSQTLMCND SLFIPTDQGQ SFPVVPKKGI TWNPSLQSTS VSSKKFENHA MLSTVQLHST DPWKQNLAAG
201: SGTMVPAKLG RALQASRHSL HGGVPPVKSS PQTNPSYNYN ASHVGSDLRK MAIAEKFQPS SKPRSYVNGL TGKLSSVCRL NLSKEKQPRG STSSEIVATS
301: YTSRLRIGNP EGKIIIKTDQ YNRDDFEVVY PNAKFFVIKS WGEANVHKSI KYGVWSSGLQ GNKKLDSAFR DAQMIAASSS TLCPVFLFFS VNESNHFCGV
401: AEMVGPVDFQ KDMDFWSMDR WVGSFPVRWH IIKNIPNVAL KCILLRNNED KPVTSSKNTQ EIHYVPGTSM LRIFKGSKTN GCLLDCFMLY EAEEARGRKC
501: RMSKLRRDAP RFIPVPKLSL RHAYVPRQPK ADRILMDRII RETHYLAGNG MQQSSWEEPG NLARYSAKAS AQKENRSSGK QAREDVVKAV IYQQQPLASN
601: MPAGPAGGQL TWEEVEVALV EKDRPQTAAN ISSKAPEESP TEVKNALVHS ASSTPETIYE EKKVIGEHCA RAISPPMSEA CSSCLIGDVL RIGSMLVPMK
701: MSN
001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
Arabidopsis Description
ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.