CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50636	Soybean	cytosol	93.23	93.09
KRH36908	Soybean	cytosol	49.14	76.8
KRH11876	Soybean	endoplasmic reticulum	67.44	66.76
VIT_05s0020g00460.t01	Wine grape	cytosol	63.4	61.62
PGSC0003DMT400011739	Potato	cytosol	53.6	53.22
KRH26322	Soybean	cytosol	9.8	53.12
Solyc12g099090.1.1	Tomato	cytosol	52.45	52.75
Bra018708.1-P	Field mustard	nucleus	41.93	47.86
CDX93645	Canola	nucleus	41.5	47.06
CDY43306	Canola	cytosol	41.21	46.66
AT1G48110.2	Thale cress	nucleus	42.8	46.48
AT3G17330.1	Thale cress	nucleus	38.62	45.04
Os03t0317000-01	Rice	plasma membrane	34.15	33.43
KRH43645	Soybean	nucleus	27.23	32.64
GSMUA_Achr8P29890_001	Banana	cytosol	37.9	32.43
GSMUA_Achr1P24980_001	Banana	nucleus	38.76	32.41
KRH13810	Soybean	nucleus, plastid	26.95	32.41
KRH46969	Soybean	endoplasmic reticulum, extracellular	29.54	31.68
KRH44697	Soybean	mitochondrion	29.97	31.61
TraesCS4D01G180500.5	Wheat	cytosol, nucleus, plastid	32.28	31.42
KRH43005	Soybean	nucleus	31.99	31.4
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	32.28	31.37
KRH59123	Soybean	nucleus	31.99	31.36
TraesCS4A01G125600.3	Wheat	cytosol, nucleus, plastid	32.28	31.15
KRH06073	Soybean	cytosol, nucleus, peroxisome	21.18	29.64
HORVU4Hr1G052390.3	Barley	golgi	31.56	29.2
KRG94807	Soybean	nucleus	27.09	28.53
KRH06717	Soybean	nucleus	26.66	27.9
KRH70155	Soybean	nucleus	25.07	27.62
Os01t0329800-01	Rice	cytosol	27.67	27.12
TraesCS3A01G199100.2	Wheat	cytosol	26.37	26.56
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	24.93	26.45
TraesCS3D01G199400.2	Wheat	cytosol	26.08	26.31
TraesCS3B01G232300.2	Wheat	cytosol	25.94	26.2
Zm00001d034996_P005	Maize	cytosol	25.94	26.16
Zm00001d049729_P008	Maize	cytosol	27.09	26.11
KXG24185	Sorghum	nucleus	27.09	25.65
Zm00001d010826_P001	Maize	cytosol	14.55	24.4
TraesCS1B01G128700.1	Wheat	cytosol	24.64	24.32
TraesCS1D01G109300.1	Wheat	cytosol	24.21	23.8
TraesCS1A01G105700.1	Wheat	cytosol	24.06	23.79
OQU77486	Sorghum	cytosol	21.61	21.19

Protein Annotations

EMBL:ACUP02010305	EnsemblPlants:KRH02430	EnsemblPlantsGene:GLYMA_17G038400	EntrezGene:100818167	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF22	PFAM:PF04146	PFscan:PS50882	ProteinID:KRH02429.1	ProteinID:KRH02430	ProteinID:KRH02430.1
SEG:seg	UniParc:UPI00029635AE	UniProt:K7MJU3	MapMan:16.5.2.1	:	:

Description

hypothetical protein

Coordinates

chr17:-:2836787..2841979

Molecular Weight (calculated)

76513.1 Da

IEP (calculated)

6.021

GRAVY (calculated)

-0.547

Length

694 amino acids

Sequence
(BLAST)

001: MEMYDVSETR NADAYLIEGT DLNLHLTSPN IQQFQAMFND GAPEFVADQN LYYPAATNYG YYCTGFESPG EWEDHHRIFG VDGPDIQYTG AQNESFPYVY
101: YTPSYGFAQS PYNPYNPYIP GAMIGVDGSF GGAEQYYSLP NYQNTISSPA YIPVVQPDNF PNSSVDSSFD TSASVSRPDG KGLKHKFNSA SGSFTRNSSK
201: SLSNPTSSLA RISEGPRDNT GVKKDLTSGR GFLNMASSPV HQARSIDAST HAVDISNGNV LSHSNQLKIA SPLSSGFSDY GSNANGQSVV AKLRPKVHVG
301: KGLSEVNGSS DVLGEQNRGP RISNYKSKFP LAVKAYANKG DDNTQENIII STDQYNREDF PVNYENAKFF VIKSYSEDDV HKSIKYNVWS STPHGNKKLQ
401: STHEDAKRIA SGNFGSCPIF LFFSVNASGQ FCGVAEMIGP VDFNKDMDFW QQDKWSGSFP VKWHIIKDVP NANFRHIILE NNENKPVTNS RDTQEIMYSK
501: GLEMLKIFKN HNLKTSLLDD FMYYENRQKI MQEEKAKLLI RSFKNPLVLP TLEPPRKLNF VIDIPPVGDE KNAKMDDEVD SLKQISSAGH IVSSSEITST
601: TSVDEKAEKG SVDKEDIASV LKIGSVTITP KQVETKPSGI SVANKEPLDV ITVGSMQIRV NGFAESSGFL KIGTIPLDPR TLQLDGGSRV KNGS

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.