Factsheet for HORVU4Hr1G052390.3

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	83.47	87.68
TraesCS4D01G180500.5	Wheat	cytosol, nucleus, plastid	83.33	87.66
TraesCS4A01G125600.3	Wheat	cytosol, nucleus, plastid	83.6	87.2
Os03t0317000-01	Rice	plasma membrane	58.27	61.64
KRH36908	Soybean	cytosol	24.0	40.54
AT3G17330.1	Thale cress	nucleus	26.53	33.45
CDX93645	Canola	nucleus	26.13	32.03
CDY43306	Canola	cytosol	26.13	31.97
KRH50636	Soybean	cytosol	29.47	31.8
Bra018708.1-P	Field mustard	nucleus	25.73	31.74
KRH02430	Soybean	cytosol	29.2	31.56
AT1G48110.2	Thale cress	nucleus	26.27	30.83
Solyc12g099090.1.1	Tomato	cytosol	28.27	30.72
VIT_05s0020g00460.t01	Wine grape	cytosol	29.07	30.53
PGSC0003DMT400011739	Potato	cytosol	27.87	29.9
KRH11876	Soybean	endoplasmic reticulum	27.33	29.24
HORVU7Hr1G069070.2	Barley	cytosol	22.13	28.14
GSMUA_Achr1P24980_001	Banana	nucleus	31.07	28.07
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	24.27	27.37
GSMUA_Achr8P29890_001	Banana	cytosol	29.33	27.13
HORVU1Hr1G008330.2	Barley	nucleus	23.2	27.1
HORVU5Hr1G104380.1	Barley	plastid	22.67	25.72
HORVU5Hr1G104390.3	Barley	plastid	23.2	25.29
HORVU3Hr1G062620.8	Barley	mitochondrion	24.93	24.13
HORVU4Hr1G072940.4	Barley	cytosol	23.47	23.72
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	20.13	23.09
HORVU7Hr1G058250.46	Barley	cytosol, plastid	14.0	22.15
HORVU2Hr1G023660.2	Barley	nucleus	18.27	19.32
HORVU2Hr1G001810.8	Barley	cytosol	18.93	18.02

Protein Annotations

EnsemblPlants:HORVU4Hr1G052390.3	EnsemblPlantsGene:HORVU4Hr1G052390	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	ncoils:Coil	PANTHER:PTHR12357	PANTHER:PTHR12357:SF60
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI000B488B94	UniProt:A0A287P231	MapMan:16.5.2.1

Description

No Description!

Coordinates

chrchr4H:+:434084111..434090629

Molecular Weight (calculated)

81833.4 Da

IEP (calculated)

6.657

GRAVY (calculated)

-0.426

Length

750 amino acids

Sequence
(BLAST)

001: MCFCGFRCLA LVQIQPWVLR LSLLELCITQ VAIYRWNTFM TRVFLIQLQT DMLTMQVCIP VAPIKLPLSL FILVGIMQNF SVFLRWIGFE PPVGWSENTN
101: YWGVDGQYLQ LQNDNLPYVY CTPGYEFSYS SQDQYTYMPG MFMGVDGSVV GSQQYFTNPY QPPGSPSGYF PIYLQPTTDL SSAVSLEPPV FSTGTSVASR
201: HANTSIKDTH QMSGNTMASQ TVPSGNPAIG SSHHAYQNQS TNKPSDLPGA NVARHDKPST SHLTVLVDTD KNFQAASGRG SSGDNGQSTD RPEVGPVAAM
301: VGEGAQSKAV SSSAVKNIVI HPDQYNKADF PCDHPDAKFF VIKSYSEDDV HKSIKYNVWS STPNGNRRLD AAYSDAKGSQ MKCPIFLFFS VNTSGQFCGV
401: AEMVGPVDFH KDMDFWQQDK WSGSFPLKWH LVKDVPNSTF RHIILENNEN KPVTNSRDTQ EIPYKSGINM LKLFKSSPMT TSILDDFPFY EGRQKAMLEQ
501: KRRHLGRSFG GLAYVPALVA KRSVVGEGEP AEVGEGISSK DPHSGKTGQD SGACEQPDKT SQTKDGVVTQ VLKKDAVSPV DQPEHAKTER HSLDDIHRQN
601: EGCSVSVSPK NVGREHAGLS ELAKSNGKVY SDCESQPLIS STEPNCSGRK GLSQEFGGHD PSDRMKDGAS GITRDMKATL VKKPEGLSTG HMDGQAKGIV
701: NESPTGVVKV GSVHIKLNVA GGSSSEIIGD GSLELKGAEH IEEAISTKLS

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.