Factsheet for HORVU7Hr1G058250.46

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G276800.3	Wheat	nucleus	60.55	45.92
TraesCS7D01G276800.4	Wheat	nucleus	60.13	45.6
TraesCS7B01G174500.1	Wheat	nucleus	56.12	44.41
HORVU1Hr1G008330.2	Barley	nucleus	56.96	42.06
Os08t0556000-01	Rice	nucleus	53.8	40.87
KXG25412	Sorghum	cytosol	51.48	38.18
Zm00001d031981_P002	Maize	cytosol	48.73	35.48
GSMUA_Achr4P12480_001	Banana	cytosol	37.76	30.81
VIT_09s0054g01600.t01	Wine grape	nucleus	41.98	29.88
GSMUA_Achr4P11560_001	Banana	nucleus	40.3	29.43
Bra034710.1-P	Field mustard	nucleus	36.5	29.12
VIT_01s0010g03690.t01	Wine grape	cytosol	35.02	29.02
KRH46969	Soybean	endoplasmic reticulum, extracellular	38.82	28.44
AT3G13060.2	Thale cress	nucleus	37.97	28.39
CDY44025	Canola	nucleus	37.13	28.3
KRH44697	Soybean	mitochondrion	39.24	28.27
CDY23562	Canola	nucleus	36.92	28.23
CDY43378	Canola	nucleus	35.87	27.69
Bra039366.1-P	Field mustard	nucleus	35.02	27.62
CDY24224	Canola	nucleus	35.65	27.52
HORVU7Hr1G069070.2	Barley	cytosol	33.54	26.95
GSMUA_Achr4P04600_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	40.93	25.16
Solyc05g032850.2.1	Tomato	nucleus	31.01	24.34
Bra006780.1-P	Field mustard	cytosol	25.53	23.77
CDX88661	Canola	nucleus	25.32	23.53
CDY58572	Canola	nucleus	24.89	23.27
CDY02802	Canola	nucleus	24.89	22.1
AT5G58190.2	Thale cress	nucleus	24.47	21.97
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	30.8	21.95
CDY32718	Canola	nucleus	24.47	21.93
CDY67303	Canola	nucleus	24.05	21.88
CDX90116	Canola	nucleus	24.05	21.88
Bra010911.1-P	Field mustard	nucleus	23.84	21.69
Bra020382.1-P	Field mustard	nucleus	24.47	20.98
VIT_11s0065g00160.t01	Wine grape	nucleus	32.49	20.95
CDY11758	Canola	nucleus, plastid	24.47	20.94
AT1G27960.1	Thale cress	cytosol	22.57	19.85
HORVU4Hr1G072940.4	Barley	cytosol	31.01	19.81
HORVU5Hr1G104380.1	Barley	plastid	27.22	19.52
HORVU5Hr1G104390.3	Barley	plastid	24.05	16.57
HORVU2Hr1G023660.2	Barley	nucleus	22.57	15.09
HORVU3Hr1G062620.8	Barley	mitochondrion	24.47	14.97
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	19.41	14.07
HORVU4Hr1G052390.3	Barley	golgi	22.15	14.0
HORVU2Hr1G001810.8	Barley	cytosol	22.57	13.58
CDY51902	Canola	cytosol	3.16	9.68

Protein Annotations

EnsemblPlants:HORVU7Hr1G058250.46	EnsemblPlantsGene:HORVU7Hr1G058250	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF57	PFAM:PF04146
PFscan:PS50882	UniParc:UPI000B46C680	UniProt:A0A287WMF1	MapMan:16.5.2.1	:	:

Description

No Description!

Coordinates

chrchr7H:-:257368075..257374037

Molecular Weight (calculated)

51902.8 Da

IEP (calculated)

6.884

GRAVY (calculated)

-0.484

Length

474 amino acids

Sequence
(BLAST)

001: RVATCTGSVT APKGCHLYGF GDRPQGSLSG ITASCIVRGR EEITVALVAS WGALCLHTAL TEISIRKGVN FGIHHRLPVP RLSLTRTLYL SGPGYENLPN
101: ECEVYPPYTR VDGLEVGPAV IYNEDPSMMY HDGYGYDPYP HYSPISMPVP AAVGGDGQPY SPQQISFSAP YYQQPSQPDM PYLGSPTPVS QGEIMMPIDP
201: TQSGFMDDTL SPNSFLFGPR PEWFRSSEET GSFLSPATSP QPLGDVSAAF GQSNSPMASG VMLPQQKSYD FGTPSDSYRR RFSHRGSFPH ATNNGGPFPG
301: YGLNGRSLIP ADKGCTRGRG NALVCSFVGS LDFLNEQSRG PRSTRPKKQL EDNSKDDKCS AGLDQGSYNR TDFVTKYKSA RFFVIKSYSE DNVHKSIKYG
401: VWASTTNGNK KLDGAYHEVK EKEEHCPIFL LFSVNASAQF CGVAEMTGPM NFEKSVDYWQ QDKWTASSLL IGTY

Best Arabidopsis Sequence Match ( AT3G13060.1 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.