Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G301100.1 | Wheat | nucleus | 78.32 | 88.23 |
| TraesCS3D01G267900.1 | Wheat | nucleus | 78.06 | 87.94 |
| TraesCS3A01G267700.1 | Wheat | nucleus | 77.16 | 86.54 |
| Os01t0679900-01 | Rice | nucleus | 57.94 | 73.73 |
| Zm00001d011602_P001 | Maize | nucleus | 54.97 | 69.95 |
| OQU87332 | Sorghum | mitochondrion, nucleus | 58.06 | 67.06 |
| Zm00001d043860_P001 | Maize | mitochondrion | 55.74 | 64.0 |
| GSMUA_Achr9P06180_001 | Banana | endoplasmic reticulum, plasma membrane | 36.26 | 45.4 |
| GSMUA_Achr6P26690_001 | Banana | cytosol | 34.45 | 43.84 |
| Bra035104.1-P | Field mustard | cytosol | 25.03 | 43.79 |
| CDX87395 | Canola | cytosol | 25.03 | 43.69 |
| CDX88524 | Canola | cytosol | 24.9 | 43.67 |
| CDY56809 | Canola | cytosol | 25.03 | 43.3 |
| CDY22270 | Canola | cytosol | 25.03 | 43.3 |
| Bra008406.1-P | Field mustard | cytosol | 25.03 | 43.3 |
| VIT_19s0085g01100.t01 | Wine grape | nucleus | 32.9 | 43.15 |
| KRH43645 | Soybean | nucleus | 30.84 | 41.28 |
| KRH13810 | Soybean | nucleus, plastid | 30.45 | 40.9 |
| Bra003615.1-P | Field mustard | nucleus | 26.32 | 40.08 |
| CDX68000 | Canola | nucleus | 26.32 | 40.08 |
| CDX79309 | Canola | nucleus | 26.06 | 39.69 |
| AT1G79270.1 | Thale cress | nucleus | 26.71 | 39.2 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 24.65 | 29.75 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 25.16 | 29.32 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 21.03 | 27.63 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 25.81 | 26.95 |
| HORVU5Hr1G104380.1 | Barley | plastid | 22.58 | 26.48 |
| HORVU5Hr1G104390.3 | Barley | plastid | 22.45 | 25.29 |
| HORVU4Hr1G052390.3 | Barley | golgi | 24.13 | 24.93 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 14.97 | 24.47 |
| HORVU2Hr1G023660.2 | Barley | nucleus | 22.32 | 24.4 |
| HORVU3Hr1G045890.2 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 19.1 | 22.63 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 22.32 | 21.95 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G062620.8 | EnsemblPlantsGene:HORVU3Hr1G062620 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF58 | PFAM:PF04146 |
| PFscan:PS50882 | SEG:seg | UniParc:UPI000B477143 | UniProt:A0A287LAZ2 | MapMan:16.5.2.1 | : |
Description
No Description!
Coordinates
chrchr3H:-:477765295..477771342
Molecular Weight (calculated)
84904.7 Da
IEP (calculated)
8.947
GRAVY (calculated)
-0.704
Length
775 amino acids
Sequence
(BLAST)
(BLAST)
001: QIFGRNRRSG CLALLLLQPP PPPPLDFRSP LRPRRFASLR CSAPTPRHPR SPAVRSRTRG RAPRPTPHAT PPTPTRLLFL LRHRRPEQPR VPASPSRPNP
101: RSSWRTRVAP ASSAATSAIE EAVENLKIDA STKASNGNLR AAKDASSSDA ISCISSADAA STAAKDTELN QGTYMGDQGM YYYGYYYPGS FGGWDENSYY
201: AGSNGLEMHP TAVHAENGSY LCYVPGYENG YTAYSQVVPG TGVDGQFVSK EPYYSAVIPV QDPSTPGMYA QPIAYGPELV PAYTWDPSYV LMDGVQGHPV
301: GVHQTSYPTR SNYPSNKHAV PSSKASRSTK YALGTTKGSS SAVDTVPTSA NNYPSSKFAN KASGASITKG HLPSSKFVAH TNQGKGSLYQ SKGTNLNESG
401: RNCNGGEKLK ARSKLNEFGD CDRSDKHNDH SKNNLSPGAD RFGLSGVQEV NDVIPSLVAV SRDSYNLPDF VTKYEQALFF VIKSYSEDDI HKSIKYNVWA
501: STPNGNKRLD NAYKIAQERM AGKGTKCPVF LFFSVNASGQ FCGVAEMLGP VDFNKSMNFW QQDKWNGFFP VKWHIIKDVP NPQFRHIILE NNENKPVTNS
601: RDTQEVKFLQ GGEMLNIFKN FSCKTSILDD FDFYENRQKV MQDRRGKPLA TSLDHLTPKD EKPAELEKQA QAASTIEHHI AKRIEEQSKD VTADVDTAKR
701: GQDQSNVDAA DAKTIEQSKV VATDVDTAKR SEESNGVAAD LDVSKGSEEQ SNKVAVELDT AKRSEEQTSS VATAG
101: RSSWRTRVAP ASSAATSAIE EAVENLKIDA STKASNGNLR AAKDASSSDA ISCISSADAA STAAKDTELN QGTYMGDQGM YYYGYYYPGS FGGWDENSYY
201: AGSNGLEMHP TAVHAENGSY LCYVPGYENG YTAYSQVVPG TGVDGQFVSK EPYYSAVIPV QDPSTPGMYA QPIAYGPELV PAYTWDPSYV LMDGVQGHPV
301: GVHQTSYPTR SNYPSNKHAV PSSKASRSTK YALGTTKGSS SAVDTVPTSA NNYPSSKFAN KASGASITKG HLPSSKFVAH TNQGKGSLYQ SKGTNLNESG
401: RNCNGGEKLK ARSKLNEFGD CDRSDKHNDH SKNNLSPGAD RFGLSGVQEV NDVIPSLVAV SRDSYNLPDF VTKYEQALFF VIKSYSEDDI HKSIKYNVWA
501: STPNGNKRLD NAYKIAQERM AGKGTKCPVF LFFSVNASGQ FCGVAEMLGP VDFNKSMNFW QQDKWNGFFP VKWHIIKDVP NPQFRHIILE NNENKPVTNS
601: RDTQEVKFLQ GGEMLNIFKN FSCKTSILDD FDFYENRQKV MQDRRGKPLA TSLDHLTPKD EKPAELEKQA QAASTIEHHI AKRIEEQSKD VTADVDTAKR
701: GQDQSNVDAA DAKTIEQSKV VATDVDTAKR SEESNGVAAD LDVSKGSEEQ SNKVAVELDT AKRSEEQTSS VATAG
001: MTSHVPKHPR KSFEDMVKNL KVDPLAKVTA STTSMVSAKE NKNQSEAEPS YYETLETYQG LPCPYGGYYG YYYPGLDGSV GEAKDNGYYG YGTEVQYPVM
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
Arabidopsis Description
ECT8Evolutionarily conserved C-terminal region 8 [Source:UniProtKB/TrEMBL;Acc:Q9FPE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.