Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56809 | Canola | cytosol | 72.54 | 85.49 |
| CDY22270 | Canola | cytosol | 72.35 | 85.27 |
| Bra008406.1-P | Field mustard | cytosol | 72.35 | 85.27 |
| CDX68000 | Canola | nucleus | 81.44 | 84.48 |
| CDX88524 | Canola | cytosol | 70.45 | 84.16 |
| CDX87395 | Canola | cytosol | 70.64 | 84.01 |
| Bra035104.1-P | Field mustard | cytosol | 70.08 | 83.52 |
| CDX79309 | Canola | nucleus | 80.3 | 83.3 |
| Bra003615.1-P | Field mustard | nucleus | 80.3 | 83.3 |
| VIT_19s0085g01100.t01 | Wine grape | nucleus | 50.76 | 45.35 |
| KRH43645 | Soybean | nucleus | 47.54 | 43.35 |
| KRH13810 | Soybean | nucleus, plastid | 47.35 | 43.33 |
| GSMUA_Achr9P06180_001 | Banana | endoplasmic reticulum, plasma membrane | 44.51 | 37.96 |
| GSMUA_Achr6P26690_001 | Banana | cytosol | 43.37 | 37.6 |
| Os01t0679900-01 | Rice | nucleus | 39.58 | 34.32 |
| Zm00001d011602_P001 | Maize | nucleus | 38.83 | 33.66 |
| AT3G03950.3 | Thale cress | cytosol | 26.52 | 32.71 |
| TraesCS3B01G301100.1 | Wheat | nucleus | 40.72 | 31.25 |
| TraesCS3D01G267900.1 | Wheat | nucleus | 40.34 | 30.96 |
| TraesCS3A01G267700.1 | Wheat | nucleus | 39.96 | 30.54 |
| AT5G61020.1 | Thale cress | cytosol | 28.41 | 30.3 |
| OQU87332 | Sorghum | mitochondrion, nucleus | 38.45 | 30.25 |
| AT1G09810.1 | Thale cress | nucleus | 26.7 | 30.0 |
| Zm00001d043860_P001 | Maize | mitochondrion | 37.88 | 29.63 |
| AT1G55500.5 | Thale cress | cytosol | 32.2 | 28.1 |
| AT5G58190.2 | Thale cress | nucleus | 27.65 | 27.65 |
| HORVU3Hr1G062620.8 | Barley | mitochondrion | 39.2 | 26.71 |
| AT3G13460.1 | Thale cress | cytosol | 32.95 | 26.09 |
| AT1G48110.2 | Thale cress | nucleus | 31.44 | 25.98 |
| AT3G17330.1 | Thale cress | nucleus | 29.17 | 25.88 |
| AT3G13060.2 | Thale cress | nucleus | 31.06 | 25.87 |
| AT1G27960.1 | Thale cress | cytosol | 25.38 | 24.86 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:844267 | ProteinID:AEE36225.1 | EMBL:AF326910 | ArrayExpress:AT1G79270 |
| EnsemblPlantsGene:AT1G79270 | RefSeq:AT1G79270 | TAIR:AT1G79270 | RefSeq:AT1G79270-TAIR-G | EnsemblPlants:AT1G79270.1 | TAIR:AT1G79270.1 |
| EMBL:AY113874 | Unigene:At.25521 | Symbol:ECT8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0005488 | InterPro:IPR007275 | RefSeq:NP_565205.1 | PFAM:PF04146 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50882 | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 |
| UniProt:Q9FPE7 | UniParc:UPI00000AA8D5 | InterPro:YTH_domain | SEG:seg | : | : |
Description
ECT8Evolutionarily conserved C-terminal region 8 [Source:UniProtKB/TrEMBL;Acc:Q9FPE7]
Coordinates
chr1:+:29815470..29819104
Molecular Weight (calculated)
59552.4 Da
IEP (calculated)
6.683
GRAVY (calculated)
-0.805
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSHVPKHPR KSFEDMVKNL KVDPLAKVTA STTSMVSAKE NKNQSEAEPS YYETLETYQG LPCPYGGYYG YYYPGLDGSV GEAKDNGYYG YGTEVQYPVM
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.