Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004105.1-P | Field mustard | nucleus | 53.54 | 66.92 |
| Bra008509.1-P | Field mustard | cytosol | 56.57 | 66.19 |
| CDY07437 | Canola | nucleus | 55.96 | 65.8 |
| CDY39299 | Canola | nucleus | 55.76 | 65.25 |
| CDY52966 | Canola | cytosol | 58.79 | 64.96 |
| CDY56132 | Canola | nucleus | 58.38 | 64.65 |
| CDY57677 | Canola | mitochondrion | 20.81 | 60.23 |
| CDY50448 | Canola | cytosol | 30.91 | 60.0 |
| CDX91541 | Canola | mitochondrion | 19.19 | 58.28 |
| Bra018951.1-P | Field mustard | cytosol | 23.23 | 44.4 |
| Bra038524.1-P | Field mustard | cytosol | 19.8 | 43.56 |
| Bra014253.1-P | Field mustard | cytosol | 26.06 | 43.29 |
| AT3G03950.3 | Thale cress | cytosol | 36.36 | 42.06 |
| AT1G55500.5 | Thale cress | cytosol | 44.85 | 36.69 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 39.6 | 35.0 |
| AT3G13460.1 | Thale cress | cytosol | 45.66 | 33.88 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 22.42 | 33.53 |
| EER93313 | Sorghum | cytosol | 38.38 | 33.22 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 38.79 | 32.65 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 38.79 | 32.6 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 40.4 | 32.21 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 39.8 | 32.03 |
| KRH70155 | Soybean | nucleus | 40.61 | 31.9 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 39.6 | 31.82 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 38.18 | 31.71 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 41.82 | 31.46 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 44.04 | 31.41 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 40.61 | 31.31 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 40.4 | 31.15 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 40.61 | 31.02 |
| Os07t0170300-01 | Rice | plasma membrane | 37.58 | 30.9 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 41.21 | 30.86 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 41.01 | 30.66 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 41.01 | 30.62 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 41.01 | 30.53 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 40.81 | 30.51 |
| KRG94807 | Soybean | nucleus | 40.61 | 30.5 |
| KRH06717 | Soybean | nucleus | 40.61 | 30.32 |
| EER93461 | Sorghum | nucleus | 40.2 | 30.2 |
| Os03t0748000-01 | Rice | plasma membrane | 40.2 | 30.11 |
| Zm00001d034005_P003 | Maize | plasma membrane | 39.8 | 29.85 |
| HORVU5Hr1G104380.1 | Barley | plastid | 38.99 | 29.2 |
| KXG34475 | Sorghum | cytosol | 37.58 | 28.79 |
| AT1G79270.1 | Thale cress | nucleus | 30.3 | 28.41 |
| AT1G09810.1 | Thale cress | nucleus | 26.87 | 28.3 |
| Os03t0158500-01 | Rice | nucleus | 40.2 | 28.15 |
| HORVU5Hr1G104390.3 | Barley | plastid | 38.99 | 28.05 |
| Zm00001d007890_P002 | Maize | mitochondrion | 36.97 | 28.02 |
| KXG40139 | Sorghum | plastid | 40.2 | 27.99 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 39.8 | 27.25 |
| Zm00001d048424_P003 | Maize | plastid | 40.61 | 27.16 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 40.0 | 27.16 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 40.2 | 26.82 |
| Zm00001d018896_P002 | Maize | mitochondrion | 37.78 | 26.49 |
| AT1G27960.1 | Thale cress | cytosol | 28.69 | 26.35 |
| TraesCS4B01G274500.2 | Wheat | plastid | 39.6 | 25.55 |
| AT3G13060.2 | Thale cress | nucleus | 31.72 | 24.76 |
| AT5G58190.2 | Thale cress | nucleus | 26.06 | 24.43 |
| Zm00001d027731_P012 | Maize | plastid | 39.19 | 24.16 |
| AT3G17330.1 | Thale cress | nucleus | 28.08 | 23.36 |
| AT1G48110.2 | Thale cress | nucleus | 29.29 | 22.69 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:836223 | UniProt:A0A178UM32 | ProteinID:AED97412.1 | ArrayExpress:AT5G61020 |
| EnsemblPlantsGene:AT5G61020 | RefSeq:AT5G61020 | TAIR:AT5G61020 | RefSeq:AT5G61020-TAIR-G | EnsemblPlants:AT5G61020.1 | TAIR:AT5G61020.1 |
| Unigene:At.21835 | Symbol:ECT3 | UniProt:F4K1Z0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0008150 | InterPro:IPR007275 | RefSeq:NP_851236.1 | ProteinID:OAO95096.1 | PFAM:PF04146 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50882 | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | UniParc:UPI00001628F0 | InterPro:YTH_domain | SEG:seg |
Description
ECT3ECT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM32]
Coordinates
chr5:-:24556994..24559936
Molecular Weight (calculated)
55228.5 Da
IEP (calculated)
8.329
GRAVY (calculated)
-0.747
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPDHVSDV LHNLSIDPTT KALAPDSETK LQGAYGGNGN DFLLNDELVE ATKIGKPSLL SKDGGVTKDK GSNLKKLGYQ SAAYNAKGSY GKGAYAYGYY
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.