Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43306 | Canola | cytosol | 74.18 | 77.32 |
| Bra018708.1-P | Field mustard | nucleus | 73.24 | 76.97 |
| CDX93645 | Canola | nucleus | 73.08 | 76.31 |
| AT3G17330.1 | Thale cress | nucleus | 58.69 | 63.03 |
| KRH36908 | Soybean | cytosol | 37.72 | 54.28 |
| VIT_05s0020g00460.t01 | Wine grape | cytosol | 48.2 | 43.14 |
| KRH02430 | Soybean | cytosol | 46.48 | 42.8 |
| KRH50636 | Soybean | cytosol | 46.48 | 42.73 |
| Solyc12g099090.1.1 | Tomato | cytosol | 44.29 | 41.01 |
| PGSC0003DMT400011739 | Potato | cytosol | 43.98 | 40.2 |
| KRH11876 | Soybean | endoplasmic reticulum | 43.98 | 40.09 |
| AT3G03950.3 | Thale cress | cytosol | 21.6 | 32.24 |
| AT1G79270.1 | Thale cress | nucleus | 25.98 | 31.44 |
| Os03t0317000-01 | Rice | plasma membrane | 33.65 | 30.32 |
| AT1G09810.1 | Thale cress | nucleus | 22.22 | 30.21 |
| AT5G61020.1 | Thale cress | cytosol | 22.69 | 29.29 |
| AT3G13060.2 | Thale cress | nucleus | 28.95 | 29.18 |
| AT1G55500.5 | Thale cress | cytosol | 27.39 | 28.93 |
| AT3G13460.1 | Thale cress | cytosol | 30.05 | 28.79 |
| TraesCS4B01G179100.3 | Wheat | cytosol, nucleus, plastid | 31.3 | 28.01 |
| TraesCS4D01G180500.5 | Wheat | cytosol, nucleus, plastid | 31.14 | 27.91 |
| AT5G58190.2 | Thale cress | nucleus | 23.0 | 27.84 |
| GSMUA_Achr1P24980_001 | Banana | nucleus | 36.15 | 27.83 |
| TraesCS4A01G125600.3 | Wheat | cytosol, nucleus, plastid | 31.14 | 27.68 |
| AT1G27960.1 | Thale cress | cytosol | 22.54 | 26.72 |
| GSMUA_Achr8P29890_001 | Banana | cytosol | 33.65 | 26.51 |
| HORVU4Hr1G052390.3 | Barley | golgi | 30.83 | 26.27 |
| Os01t0329800-01 | Rice | cytosol | 28.64 | 25.85 |
| HORVU3Hr1G045890.2 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 25.2 | 24.62 |
| TraesCS3A01G199100.2 | Wheat | cytosol | 26.29 | 24.38 |
| TraesCS3B01G232300.2 | Wheat | cytosol | 26.13 | 24.31 |
| Zm00001d049729_P008 | Maize | cytosol | 27.39 | 24.31 |
| TraesCS3D01G199400.2 | Wheat | cytosol | 26.13 | 24.27 |
| Zm00001d034996_P005 | Maize | cytosol | 26.13 | 24.27 |
| KXG24185 | Sorghum | nucleus | 27.7 | 24.15 |
| TraesCS1B01G128700.1 | Wheat | cytosol | 24.26 | 22.05 |
| OQU77486 | Sorghum | cytosol | 24.1 | 21.75 |
| TraesCS1D01G109300.1 | Wheat | cytosol | 23.94 | 21.67 |
| Zm00001d010826_P001 | Maize | cytosol | 13.77 | 21.26 |
| TraesCS1A01G105700.1 | Wheat | cytosol | 23.32 | 21.23 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:841229 | ProteinID:AEE32249.1 | ProteinID:AEE32250.1 | ArrayExpress:AT1G48110 |
| EnsemblPlantsGene:AT1G48110 | RefSeq:AT1G48110 | TAIR:AT1G48110 | RefSeq:AT1G48110-TAIR-G | EnsemblPlants:AT1G48110.2 | TAIR:AT1G48110.2 |
| Unigene:At.48286 | Symbol:ECT7 | UniProt:F4HWS5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0005488 | InterPro:IPR007275 | RefSeq:NP_001117446.1 | RefSeq:NP_175245.1 | PFAM:PF04146 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50882 | PANTHER:PTHR12357 |
| PANTHER:PTHR12357:SF22 | UniParc:UPI000016309A | InterPro:YTH_domain | SEG:seg | : | : |
Description
ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
Coordinates
chr1:-:17769938..17773493
Molecular Weight (calculated)
70866.1 Da
IEP (calculated)
6.949
GRAVY (calculated)
-0.743
Length
639 amino acids
Sequence
(BLAST)
(BLAST)
001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.